C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 146
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000608991 RNF146-011 ENSG00000118518 9606 + 6:127266883-127288362 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000608991
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000608991 6.356±0.00 3.866±0.00 7.728±0.00 2.717±0.50 1.169±0.00 2.863±0.00 2.046±0.00 1.746±0.00 6.581±3.46 4.911±0.00 6.751±2.98

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005829 IDA cytosol
GO:0008270 IEA zinc ion binding
GO:0016055 IEA Wnt signaling pathway
GO:0016874 IEA ligase activity
GO:0042787 IMP protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0051865 IDA protein autoubiquitination
GO:0070936 IMP protein K48-linked ubiquitination
GO:0072572 IDA poly-ADP-D-ribose binding
GO:0090263 IMP positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037548 Rnf146-201 protein_coding Mus_musculus 0 1844
ENSMUST00000160144 Rnf146-001 protein_coding Mus_musculus 0 1844
ENSMUST00000160372 Rnf146-002 protein_coding Mus_musculus 0 1840
ENSMUST00000162335 Rnf146-003 protein_coding Mus_musculus 0 1528
ENSMUST00000161508 Rnf146-004 protein_coding Mus_musculus 0 907
ENSMUST00000020034 Echdc1-001 protein_coding Mus_musculus 0 324

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