C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TGFB-induced factor homeobox 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118707 TGIF2 9606 + 20:36573488-36593950 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373872 TGIF2-001 36573607-36593950 protein_coding
  ENST00000373874 TGIF2-002 36573488-36593950 protein_coding
  ENST00000557885 TGIF2-006 36578827-36591923 protein_coding
  ENST00000558028 TGIF2-004 36574554-36591239 protein_coding
  ENST00000558465 TGIF2-007 36578925-36592298 protein_coding
  ENST00000560025 TGIF2-003 36574672-36591429 protein_coding
  ENST00000561398 TGIF2-005 36578807-36592141 protein_coding
  ENST00000611732 TGIF2-201 36574554-36593945 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373872ENST00000373874ENST00000558465ENST00000560025ENST00000611732
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373872 4.771±0.00 9.077±0.00 N/A N/A 4.282±1.82 3.053±0.00 2.509±0.00 3.866±0.00 N/A 5.297±2.76 N/A 8.776±3.75 4.569±1.87 5.759±2.15
ENST00000373874 2.178±0.00 N/A N/A 0.560±0.00 N/A N/A 0.355±0.00 0.911±0.00 N/A N/A N/A N/A N/A 5.101±0.00
ENST00000558465 N/A N/A 1.100±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560025 N/A N/A N/A N/A N/A N/A N/A 1.519±0.00 N/A N/A N/A N/A N/A N/A
ENST00000611732 N/A N/A 0.832±0.00 N/A N/A N/A N/A N/A 1.851±0.00 N/A 0.575±0.00 2.299±0.00 4.266±0.00 2.553±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RT CIL_0006RT_0002 CGP 20:36541484-36593950

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 TAS transcription, DNA-templated
GO:0006355 IEA:NAS regulation of transcription, DNA-templated
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0010467 TAS gene expression
GO:0010470 IEA regulation of gastrulation
GO:0038092 IEA nodal signaling pathway
GO:0045666 IEA positive regulation of neuron differentiation
GO:0060041 IEA retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088703 TGIF2 TGFB-induced factor homeobox 2 protein_coding Danio_rerio
ENSMUSG00000062175 Tgif2 TGFB-induced factor homeobox 2 protein_coding Mus_musculus

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