| Transcript ID | Kidney |
|---|---|
| ENST00000560025 | 1.519±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | TGFB-induced factor homeobox 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000560025  |
TGIF2-003 |
ENSG00000118707 |
9606 | + |
20:36574672-36591429  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006RT | CIL_0006RT_0002 | CGP | 20:36541484-36593950 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000122 | IMP | negative regulation of transcription from RNA polymerase II promoter |
| GO:0003677 | IEA | DNA binding |
| GO:0003700 | NAS | sequence-specific DNA binding transcription factor activity |
| GO:0005634 | IDA | nucleus |
| GO:0005654 | TAS | nucleoplasm |
| GO:0006351 | TAS | transcription, DNA-templated |
| GO:0006355 | IEA:NAS | regulation of transcription, DNA-templated |
| GO:0006367 | TAS | transcription initiation from RNA polymerase II promoter |
| GO:0007179 | TAS | transforming growth factor beta receptor signaling pathway |
| GO:0010467 | TAS | gene expression |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000081335
|
Tgif2-001 | protein_coding | Mus_musculus | 0 | 894 |
|
ENSMUST00000061746
|
Gm7148-001 | processed_pseudogene | Mus_musculus | 0 | 869 |
|
ENSMUST00000121213
|
Gm12605-001 | unprocessed_pseudogene | Mus_musculus | 0 | 750 |
|
ENSMUST00000176281
|
Tgif2-006 | processed_transcript | Mus_musculus | 0 | 547 |
|
ENSMUST00000073352
|
Tgif2-002 | protein_coding | Mus_musculus | 0 | 407 |
|
ENSMUST00000150078
|
Tgif2-003 | nonsense_mediated_decay | Mus_musculus | 0 | 268 |
