C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TGFB-induced factor homeobox 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062175 Tgif2 10090 + 2:156840007-156855570 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000073352 Tgif2-002 156840100-156855570 protein_coding
  ENSMUST00000081335 Tgif2-001 156840007-156855570 protein_coding
  ENSMUST00000150078 Tgif2-003 156841022-156847674 nonsense_mediated_decay
  ENSMUST00000175634 Tgif2-005 156849956-156853193 processed_transcript
  ENSMUST00000176281 Tgif2-006 156850836-156853547 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000073352ENSMUST00000081335
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000073352 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.193±0.00 N/A
ENSMUST00000081335 2.888±0.35 0.711±0.00 2.302±0.67 1.287±0.30 0.656±0.15 0.470±0.01 0.385±0.27 0.983±0.18 3.947±1.03 1.381±0.21 1.123±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RT CIL_0006RT_0003 CGP 2:156775420-156855570

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0010470 IGI regulation of gastrulation
GO:0038092 IGI nodal signaling pathway
GO:0045666 IDA positive regulation of neuron differentiation
GO:0060041 IDA retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088703 TGIF2 TGFB-induced factor homeobox 2 protein_coding Danio_rerio
ENSG00000118707 TGIF2 TGFB-induced factor homeobox 2 protein_coding Homo_sapiens

Loading