C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cyclin I
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118816 CCNI 9606 - 4:77047158-77076005 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000237654 CCNI-001 77047158-77076005 protein_coding
  ENST00000504697 CCNI-009 77056065-77065080 processed_transcript
  ENST00000505609 CCNI-003 77056044-77074910 protein_coding
  ENST00000506614 CCNI-007 77055234-77056485 retained_intron
  ENST00000507788 CCNI-004 77058559-77075989 protein_coding
  ENST00000511943 CCNI-005 77055323-77075693 nonsense_mediated_decay
  ENST00000513774 CCNI-002 77058510-77075332 protein_coding
  ENST00000515468 CCNI-008 77048115-77056049 protein_coding
  ENST00000515790 CCNI-006 77066165-77075620 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000237654ENST00000515468
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000237654 219.442±0.00 118.246±0.00 15.111±0.00 98.729±71.49 81.406±61.86 132.384±113.12 62.298±49.38 70.218±57.48 27.155±2.59 95.701±81.71 59.436±45.01 89.129±76.44 54.641±7.08 127.544±92.92
ENST00000515468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 67.724±0.00 81.220±0.00 85.042±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WJ CIL_0008WJ_0001 VISTA 4:76511627-77112790
CIL_0008OK CIL_0008OK_0001 VISTA 4:76686015-77293072
CIL_00069X CIL_00069X_0001 CGP 4:76949703-77076005

Gene Ontology
GO IDEvidence TypeGO Description
GO:0007283 NAS spermatogenesis
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068214 ccni cyclin I protein_coding Danio_rerio
ENSMUSG00000063015 Ccni cyclin I protein_coding Mus_musculus

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