C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000237654 CCNI-001 ENSG00000118816 9606 - 4:77047158-77076005 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000237654
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000237654 219.442±0.00 118.246±0.00 15.111±0.00 98.729±71.49 81.406±61.86 132.384±113.12 62.298±49.38 70.218±57.48 27.155±2.59 95.701±81.71 59.436±45.01 89.129±76.44 54.641±7.08 127.544±92.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WJ CIL_0008WJ_0001 VISTA 4:76511627-77112790
CIL_0008OK CIL_0008OK_0001 VISTA 4:76686015-77293072
CIL_00069X CIL_00069X_0001 CGP 4:76949703-77076005

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007283 NAS spermatogenesis
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058550 Ccni-001 protein_coding Mus_musculus 0 2182
ENSMUST00000151568 Ccni-003 protein_coding Mus_musculus 0 826
ENSMUST00000123033 Ccni-004 retained_intron Mus_musculus 0 595
ENSMUST00000144514 Ccni-002 protein_coding Mus_musculus 0 436

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