C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 86, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118894 FAM86A 9606 - 16:5084304-5097808 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000427587 FAM86A-001 5084304-5097808 protein_coding
  ENST00000458008 FAM86A-002 5084304-5097788 protein_coding
  ENST00000585436 FAM86A-008 5084718-5097754 nonsense_mediated_decay
  ENST00000585975 FAM86A-010 5089176-5097778 retained_intron
  ENST00000586444 FAM86A-009 5090241-5097786 retained_intron
  ENST00000587133 FAM86A-011 5085572-5097742 protein_coding
  ENST00000587161 FAM86A-003 5085363-5097766 nonsense_mediated_decay
  ENST00000587200 FAM86A-013 5085615-5097774 nonsense_mediated_decay
  ENST00000587608 FAM86A-014 5085536-5089428 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000427587ENST00000458008ENST00000585436ENST00000587608
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000427587 N/A N/A 0.935±0.00 N/A N/A 3.690±0.00 N/A N/A 10.922±6.55 4.114±1.15 8.091±0.00
ENST00000458008 N/A N/A 1.409±0.00 0.587±0.00 3.620±0.00 N/A 1.758±0.00 8.660±0.00 3.248±0.00 N/A 4.021±0.00
ENST00000585436 2.396±0.00 2.029±0.00 1.780±0.00 N/A 4.970±0.00 1.007±0.00 1.799±0.00 N/A 9.204±7.30 4.716±1.14 6.254±0.00
ENST00000587608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.660±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EQ CIL_0000EQ_0001 CGP 16:5084304-7713338

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054950 fam86a family with sequence similarity 86, member A protein_coding Danio_rerio
ENSMUSG00000022544 Fam86 family with sequence similarity 86 protein_coding Mus_musculus

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