Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	family with sequence similarity 86, member A
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000118894	FAM86A	9606	-	16:5084304-5097808	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000427587		FAM86A-001	5084304-5097808	protein_coding
	ENST00000458008		FAM86A-002	5084304-5097788	protein_coding
	ENST00000585436		FAM86A-008	5084718-5097754	nonsense_mediated_decay
	ENST00000585975		FAM86A-010	5089176-5097778	retained_intron
	ENST00000586444		FAM86A-009	5090241-5097786	retained_intron
	ENST00000587133		FAM86A-011	5085572-5097742	protein_coding
	ENST00000587161		FAM86A-003	5085363-5097766	nonsense_mediated_decay
	ENST00000587200		FAM86A-013	5085615-5097774	nonsense_mediated_decay
	ENST00000587608		FAM86A-014	5085536-5089428	retained_intron

Expression Patterns

Transcript ID	Adipose	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000427587	N/A	N/A	0.935±0.00	N/A	N/A	3.690±0.00	N/A	N/A	10.922±6.55	4.114±1.15	8.091±0.00
ENST00000458008	N/A	N/A	1.409±0.00	0.587±0.00	3.620±0.00	N/A	1.758±0.00	8.660±0.00	3.248±0.00	N/A	4.021±0.00
ENST00000585436	2.396±0.00	2.029±0.00	1.780±0.00	N/A	4.970±0.00	1.007±0.00	1.799±0.00	N/A	9.204±7.30	4.716±1.14	6.254±0.00
ENST00000587608	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	28.660±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0000EQ	CIL_0000EQ_0001	CGP	16:5084304-7713338

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005737	IEA	cytoplasm

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000054950	fam86a	family with sequence similarity 86, member A	protein_coding	Danio_rerio
ENSMUSG00000022544	Fam86	family with sequence similarity 86	protein_coding	Mus_musculus

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