C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 86, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000585436 FAM86A-008 ENSG00000118894 9606 - 16:5084718-5097754 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000585436
Transcript ID Adipose Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000585436 2.396±0.00 2.029±0.00 1.780±0.00 4.970±0.00 1.007±0.00 1.799±0.00 9.204±7.30 4.716±1.14 6.254±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EQ CIL_0000EQ_0001 CGP 16:5084304-7713338

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064635 Fam86-001 protein_coding Mus_musculus 0 259
ENSMUST00000139584 Fam86-003 protein_coding Mus_musculus 0 259
ENSMUST00000132225 Fam86-002 retained_intron Mus_musculus 8e-31 139
ENSMUST00000140718 Fam86-005 retained_intron Mus_musculus 3e-25 121

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