C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAD23 homolog B (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000119318 RAD23B 9606 + 9:107283137-107332194 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358015 RAD23B-001 107283279-107332194 protein_coding
  ENST00000416373 RAD23B-201 107284053-107332192 protein_coding
  ENST00000419616 RAD23B-002 107283137-107306590 protein_coding
  ENST00000442587 RAD23B-003 107284695-107306453 protein_coding
  ENST00000457811 RAD23B-004 107306542-107332189 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358015ENST00000416373
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358015 35.814±0.00 21.480±0.00 5.235±0.00 12.941±0.90 29.720±22.27 21.951±12.61 14.934±7.79 19.237±5.25 21.621±8.94 16.897±9.45 27.175±20.05 23.818±4.25 23.985±11.40 43.659±0.00
ENST00000416373 N/A N/A N/A N/A N/A N/A N/A 3.704±0.00 N/A N/A N/A N/A 4.696±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000225 CIL_000225_0002 CGP 9:107283137-107490482

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0000715 IDA nucleotide-excision repair, DNA damage recognition
GO:0000718 TAS nucleotide-excision repair, DNA damage removal
GO:0003684 IEA damaged DNA binding
GO:0003697 TAS single-stranded DNA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0006281 TAS DNA repair
GO:0006289 IDA:IEA nucleotide-excision repair
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0007283 IEA spermatogenesis
GO:0031593 IDA polyubiquitin binding
GO:0032434 IDA regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0043161 IEA proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0071942 IDA XPC complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021550 rad23b RAD23 homolog B (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000028426 Rad23b RAD23b homolog (S. cerevisiae) protein_coding Mus_musculus

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