C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ras homolog family member Q
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000119729 RHOQ 9606 + 2:46541806-46583121 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000238738 RHOQ-001 46542728-46583121 protein_coding
  ENST00000432183 RHOQ-003 46542736-46576656 nonsense_mediated_decay
  ENST00000465198 RHOQ-004 46541806-46576249 processed_transcript
  ENST00000473428 RHOQ-007 46543767-46581318 nonsense_mediated_decay
  ENST00000482449 RHOQ-002 46543400-46576656 protein_coding
  ENST00000489448 RHOQ-008 46580284-46581046 retained_intron
  ENST00000489471 RHOQ-006 46543149-46581270 nonsense_mediated_decay
  ENST00000494370 RHOQ-005 46576128-46577125 retained_intron
  ENST00000616091 RHOQ-201 46543021-46581083 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000238738ENST00000616091
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000238738 25.942±0.00 13.416±0.00 16.179±0.00 28.274±22.40 14.626±10.63 43.043±29.64 16.132±0.00 3.537±0.00 24.857±0.00 18.356±8.47 10.370±4.11 10.641±2.02 16.262±0.00
ENST00000616091 N/A N/A N/A N/A N/A N/A N/A 20.363±0.00 7.792±0.00 N/A N/A 20.052±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NR CIL_0001NR_0001 CGP 2:46429190-46542557
CIL_0001NS CIL_0001NS_0001 CGP 2:46490750-46583121
CIL_0001ND CIL_0001ND_0001 CGP 2:46541806-46617119

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IDA GTPase activity
GO:0005515 IEA protein binding
GO:0005522 IPI profilin binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0005884 IDA actin filament
GO:0005886 IDA plasma membrane
GO:0006184 IDA:IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA:TAS small GTPase mediated signal transduction
GO:0008286 IMP insulin receptor signaling pathway
GO:0008360 IEA regulation of cell shape
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0030866 IMP cortical actin cytoskeleton organization
GO:0032427 IPI GBD domain binding
GO:0032869 IMP cellular response to insulin stimulus
GO:0032956 IC regulation of actin cytoskeleton organization
GO:0045121 IEA membrane raft
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046326 IMP positive regulation of glucose import
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:0051491 IDA positive regulation of filopodium assembly
GO:0070062 IDA extracellular vesicular exosome
GO:0090005 IMP negative regulation of establishment of protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025953 rhoq ras homolog gene family, member Q protein_coding Danio_rerio
ENSMUSG00000024143 Rhoq ras homolog gene family, member Q protein_coding Mus_musculus

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