C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Yip1 domain family, member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000119820 YIPF4 9606 + 2:32277910-32316594 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000238831 YIPF4-001 32277910-32316594 protein_coding
  ENST00000437765 YIPF4-003 32278231-32305866 nonsense_mediated_decay
  ENST00000441084 YIPF4-004 32301443-32307362 protein_coding
  ENST00000495355 YIPF4-002 32278129-32290920 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000238831ENST00000437765
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000238831 2.582±0.00 4.034±0.00 1.057±0.00 3.750±1.73 2.551±1.03 2.654±0.96 2.154±1.21 2.599±1.05 1.966±0.02 1.737±0.17 1.279±0.78 2.794±0.46 1.817±0.37 2.735±0.62
ENST00000437765 9.885±0.00 N/A 6.822±0.00 12.130±0.00 11.209±2.04 13.338±5.26 10.265±4.38 10.080±0.54 9.353±3.01 11.782±1.63 5.416±1.35 13.125±3.30 6.579±2.03 10.700±2.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MY CIL_0000MY_0001 CGP 2:32224453-32316594
CIL_0003JH CIL_0003JH_0002 CGP 2:32277910-32618899

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030957 yipf4 Yip1 domain family, member 4 protein_coding Danio_rerio
ENSMUSG00000024072 Yipf4 Yip1 domain family, member 4 protein_coding Mus_musculus

Loading