C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Yip1 domain family, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000238831 YIPF4-001 ENSG00000119820 9606 + 2:32277910-32316594 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000238831
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000238831 2.582±0.00 4.034±0.00 1.057±0.00 3.750±1.73 2.551±1.03 2.654±0.96 2.154±1.21 2.599±1.05 1.966±0.02 1.737±0.17 1.279±0.78 2.794±0.46 1.817±0.37 2.735±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MY CIL_0000MY_0001 CGP 2:32224453-32316594
CIL_0003JH CIL_0003JH_0002 CGP 2:32277910-32618899

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024873 Yipf4-201 protein_coding Mus_musculus 0 1548
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.00006 57
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0002 55

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