C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tectonic family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000119977 TCTN3 9606 - 10:95663396-95694143 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265993 TCTN3-001 95663401-95694143 protein_coding
  ENST00000371209 TCTN3-007 95683261-95693899 protein_coding
  ENST00000371217 TCTN3-009 95663401-95693923 protein_coding
  ENST00000430368 TCTN3-010 95663696-95693926 protein_coding
  ENST00000478245 TCTN3-006 95692864-95693901 retained_intron
  ENST00000497399 TCTN3-005 95687082-95693955 retained_intron
  ENST00000614499 TCTN3-201 95663396-95694143 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265993ENST00000371209ENST00000371217ENST00000430368ENST00000478245
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265993 N/A 1.341±0.00 N/A N/A N/A N/A 0.429±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000371209 N/A N/A 0.853±0.00 N/A N/A N/A N/A N/A 1.606±0.00 N/A N/A N/A N/A N/A
ENST00000371217 7.037±0.00 8.878±0.00 0.851±0.00 3.365±2.21 4.966±4.39 3.896±2.87 1.527±1.37 10.195±6.36 4.385±3.90 5.257±4.04 1.821±1.43 11.977±7.96 20.121±4.67 11.669±2.02
ENST00000430368 N/A N/A N/A N/A 0.788±0.00 N/A 0.571±0.00 N/A 0.303±0.00 N/A 0.764±0.12 3.552±0.00 4.632±0.00 3.423±0.00
ENST00000478245 N/A N/A N/A 2.161±0.00 N/A N/A N/A N/A N/A N/A 2.244±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095J CIL_00095J_0001 VISTA 10:95113366-95716533
CIL_0007T2 CIL_0007T2_0001 VISTA 10:95207959-95809585
CIL_00067D CIL_00067D_0001 CGP 10:95605929-95694143
CIL_00067C CIL_00067C_0001 CGP 10:95663396-95877266

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006915 IEA apoptotic process
GO:0007224 IMP smoothened signaling pathway
GO:0016021 IEA integral component of membrane
GO:0060271 ISS cilium morphogenesis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000025008 Tctn3 tectonic family member 3 protein_coding Mus_musculus

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