C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tectonic family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371217 TCTN3-009 ENSG00000119977 9606 - 10:95663401-95693923 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371217
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371217 7.037±0.00 8.878±0.00 0.851±0.00 3.365±2.21 4.966±4.39 3.896±2.87 1.527±1.37 10.195±6.36 4.385±3.90 5.257±4.04 1.821±1.43 11.977±7.96 20.121±4.67 11.669±2.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095J CIL_00095J_0001 VISTA 10:95113366-95716533
CIL_0007T2 CIL_0007T2_0001 VISTA 10:95207959-95809585
CIL_00067D CIL_00067D_0001 CGP 10:95605929-95694143
CIL_00067C CIL_00067C_0001 CGP 10:95663396-95877266

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006915 IEA apoptotic process
GO:0007224 IMP smoothened signaling pathway
GO:0016021 IEA integral component of membrane
GO:0060271 ISS cilium morphogenesis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025981 Tctn3-001 protein_coding Mus_musculus 0 1426
ENSMUST00000135795 Tctn3-002 protein_coding Mus_musculus 0 1085
ENSMUST00000132452 Tctn3-003 protein_coding Mus_musculus 0 797
ENSMUST00000144566 Tctn3-005 retained_intron Mus_musculus 0 257

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