C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tectonic family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430368 TCTN3-010 ENSG00000119977 9606 - 10:95663696-95693926 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLiverMuscleOvaryPlacentaTestisENST00000430368
Transcript ID Breast Heart Liver Muscle Ovary Placenta Testis
ENST00000430368 0.788±0.00 0.571±0.00 0.303±0.00 0.764±0.12 3.552±0.00 4.632±0.00 3.423±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095J CIL_00095J_0001 VISTA 10:95113366-95716533
CIL_0007T2 CIL_0007T2_0001 VISTA 10:95207959-95809585
CIL_00067D CIL_00067D_0001 CGP 10:95605929-95694143
CIL_00067C CIL_00067C_0001 CGP 10:95663396-95877266

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006915 IEA apoptotic process
GO:0007224 IMP smoothened signaling pathway
GO:0016021 IEA integral component of membrane
GO:0060271 ISS cilium morphogenesis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025981 Tctn3-001 protein_coding Mus_musculus 0 632
ENSMUST00000144566 Tctn3-005 retained_intron Mus_musculus 0 261
ENSMUST00000132452 Tctn3-003 protein_coding Mus_musculus 0 257
ENSMUST00000135795 Tctn3-002 protein_coding Mus_musculus 0 257

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