C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain 55
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000120314 WDR55 9606 + 5:140664676-140674124 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358337 WDR55-001 140664676-140672345 protein_coding
  ENST00000504897 WDR55-004 140668234-140674124 nonsense_mediated_decay
  ENST00000506393 WDR55-003 140664868-140672344 nonsense_mediated_decay
  ENST00000511232 WDR55-002 140666575-140672344 retained_intron
  ENST00000520764 WDR55-006 140668921-140672366 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastLiverLungPlacentaENST00000358337
Transcript ID Adipose Breast Liver Lung Placenta
ENST00000358337 10.649±0.00 2.230±0.00 5.177±0.00 1.917±0.00 5.883±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZH CIL_0006ZH_0001 CGP 5:140647058-140674124
CIL_0006ZK CIL_0006ZK_0001 CGP 5:140664676-140674124

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005730 ISS nucleolus
GO:0005737 IEA cytoplasm
GO:0006364 ISS rRNA processing
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007217 wdr55 WD repeat domain 55 protein_coding Danio_rerio
ENSMUSG00000042660 Wdr55 WD repeat domain 55 protein_coding Mus_musculus

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