C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006ZK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120314-ENSG00000120314 CGP 9606 5:140664676-140674124
GeneTranscriptPositionBiotype
ENSG00000120314 (WDR55)
WD repeat domain 55 		ENST00000358337 (WDR55-001) 140664676-140672345 protein_coding
ENST00000504897 (WDR55-004) 140668234-140674124 nonsense_mediated_decay
ENST00000506393 (WDR55-003) 140664868-140672344 nonsense_mediated_decay
ENST00000511232 (WDR55-002) 140666575-140672344 retained_intron
ENST00000520764 (WDR55-006) 140668921-140672366 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0006ZK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042660-ENSMUSG00000044595 CGP 10090 18:36760239-36766214
GeneTranscriptPositionBiotype
ENSMUSG00000042660 (Wdr55)
WD repeat domain 55 		ENSMUST00000049323 (Wdr55-201) 36760239-36763708 protein_coding
ENSMUSG00000044595 (Dnd1)
dead end homolog 1 (zebrafish) 		ENSMUST00000061522 (Dnd1-001) 36763673-36766198 protein_coding
ENSMUST00000124038 (Dnd1-003) 36763675-36766198 retained_intron
ENSMUST00000155827 (Dnd1-002) 36763671-36766214 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZK_0001ENSG00000120314ENST00000358337ENST00000504897ENST00000506393ENST00000511232ENST00000520764CIL_0006ZK_0002ENSMUSG00000042660ENSMUST00000049323ENSMUSG00000044595ENSMUST00000061522ENSMUST00000124038ENSMUST00000155827
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZK_0001ENSG00000120314ENST00000358337CIL_0006ZK_0002ENSMUSG00000042660ENSMUST00000049323ENSMUSG00000044595ENSMUST00000061522ENSMUST00000124038ENSMUST00000155827
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120314 ENST00000358337 10.649±0.00 N/A N/A N/A 2.230±0.00 N/A N/A N/A 5.177±0.00 1.917±0.00 N/A N/A 5.883±0.55 N/A
ENST00000504897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042660 ENSMUST00000049323 10.037±3.41 8.188±0.95 12.805±0.23 11.023±3.49 6.648±1.64 7.038±1.52 4.468±0.42 14.264±1.80 21.715±18.86 6.511±0.44 8.088±0.39 12.177±3.99 13.374±5.95 5.345±1.38
ENSMUSG00000044595 ENSMUST00000061522 N/A 10.082±1.79 N/A 2.047±0.38 1.346±0.22 1.232±0.20 1.818±0.42 N/A 0.719±0.24 1.283±0.25 N/A 6.143±1.31 N/A 1.112±0.05
ENSMUST00000124038 N/A N/A N/A N/A N/A 0.972±0.00 N/A N/A N/A N/A N/A 1.431±0.00 N/A N/A
ENSMUST00000155827 N/A N/A N/A N/A N/A 1.045±0.00 N/A N/A N/A 0.557±0.00 N/A 1.467±0.00 N/A 1.884±1.00

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