C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006ZH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000113141-ENSG00000120314 CGP 9606 5:140647058-140674124
GeneTranscriptPositionBiotype
ENSG00000113141 (IK)
IK cytokine, down-regulator of HLA II 		ENST00000417647 (IK-001) 140647770-140662478 protein_coding
ENST00000502899 (IK-006) 140648094-140654728 protein_coding
ENST00000503332 (IK-008) 140647829-140653102 nonsense_mediated_decay
ENST00000507593 (IK-009) 140647842-140653141 protein_coding
ENST00000508301 (IK-010) 140647842-140655993 protein_coding
ENST00000512827 (IK-007) 140648314-140651747 retained_intron
ENST00000513256 (IK-005) 140647058-140653073 protein_coding
ENST00000515015 (IK-011) 140658979-140660885 retained_intron
ENST00000515592 (IK-004) 140660155-140662479 retained_intron
ENST00000523672 (IK-013) 140647928-140653134 processed_transcript
ENST00000610522 (IK-201) 140658736-140662214 protein_coding
ENST00000613660 (IK-202) 140647799-140662479 protein_coding
ENST00000620556 (IK-203) 140647875-140662479 protein_coding
ENSG00000120314 (WDR55)
WD repeat domain 55 		ENST00000358337 (WDR55-001) 140664676-140672345 protein_coding
ENST00000504897 (WDR55-004) 140668234-140674124 nonsense_mediated_decay
ENST00000506393 (WDR55-003) 140664868-140672344 nonsense_mediated_decay
ENST00000511232 (WDR55-002) 140666575-140672344 retained_intron
ENST00000520764 (WDR55-006) 140668921-140672366 processed_transcript
ENSG00000131495 (NDUFA2)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa 		ENST00000252102 (NDUFA2-001) 140645285-140647785 protein_coding
ENST00000502960 (NDUFA2-003) 140645474-140647771 retained_intron
ENST00000510680 (NDUFA2-007) 140638740-140647314 processed_transcript
ENST00000512088 (NDUFA2-004) 140645369-140647645 protein_coding
CIL_0006ZH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024474-ENSMUSG00000042660 CGP 10090 18:36744656-36763708
GeneTranscriptPositionBiotype
ENSMUSG00000024474 (Ik)
IK cytokine 		ENSMUST00000007042 (Ik-201) 36744656-36757639 protein_coding
ENSMUSG00000042660 (Wdr55)
WD repeat domain 55 		ENSMUST00000049323 (Wdr55-201) 36760239-36763708 protein_coding
ENSMUSG00000044595 (Dnd1)
dead end homolog 1 (zebrafish) 		ENSMUST00000061522 (Dnd1-001) 36763673-36766198 protein_coding
ENSMUST00000124038 (Dnd1-003) 36763675-36766198 retained_intron
ENSMUST00000155827 (Dnd1-002) 36763671-36766214 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZH_0001ENSG00000113141ENST00000417647ENST00000502899ENST00000503332ENST00000507593ENST00000508301ENST00000512827ENST00000513256ENST00000515015ENST00000515592ENST00000523672ENST00000610522ENST00000613660ENST00000620556ENSG00000120314ENST00000358337ENST00000504897ENST00000506393ENST00000511232ENST00000520764ENSG00000131495ENST00000252102ENST00000502960ENST00000510680ENST00000512088CIL_0006ZH_0002ENSMUSG00000024474ENSMUST00000007042ENSMUSG00000042660ENSMUST00000049323ENSMUSG00000044595ENSMUST00000061522ENSMUST00000124038ENSMUST00000155827
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZH_0001ENSG00000113141ENST00000417647ENST00000502899ENST00000507593ENST00000508301ENST00000513256ENST00000610522ENST00000613660ENST00000620556ENSG00000120314ENST00000358337ENSG00000131495ENST00000252102ENST00000502960ENST00000512088CIL_0006ZH_0002ENSMUSG00000024474ENSMUST00000007042ENSMUSG00000042660ENSMUST00000049323ENSMUSG00000044595ENSMUST00000061522ENSMUST00000124038ENSMUST00000155827
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113141 ENST00000417647 N/A 10.415±0.00 1.652±0.00 4.426±0.00 4.630±0.00 2.188±0.00 2.665±0.00 4.247±0.00 7.308±0.00 5.472±0.00 N/A 30.397±27.40 N/A 21.379±0.00
ENST00000502899 N/A N/A N/A N/A N/A N/A N/A N/A 11.511±0.00 N/A N/A N/A N/A N/A
ENST00000503332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 44.499±0.00 N/A
ENST00000508301 N/A N/A 2.385±0.00 3.286±0.00 4.611±0.00 4.703±0.00 1.888±0.00 7.803±0.00 N/A 9.447±0.00 2.545±0.00 5.628±0.00 N/A N/A
ENST00000512827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513256 N/A N/A N/A N/A 18.822±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610522 66.082±0.00 46.989±0.00 3.079±0.00 54.243±0.00 49.624±0.00 37.041±32.18 17.028±0.00 39.403±0.00 17.668±0.00 54.861±0.00 63.726±0.00 45.187±7.38 39.232±17.15 131.071±42.88
ENST00000613660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.131±0.00 N/A N/A N/A
ENST00000620556 40.365±0.00 29.779±0.00 N/A 16.681±15.24 34.554±0.00 27.070±25.11 16.074±0.00 8.868±0.00 10.215±0.00 35.133±0.00 45.421±0.00 25.789±5.46 26.791±3.26 69.942±0.34
ENSG00000120314 ENST00000358337 10.649±0.00 N/A N/A N/A 2.230±0.00 N/A N/A N/A 5.177±0.00 1.917±0.00 N/A N/A 5.883±0.55 N/A
ENST00000504897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000131495 ENST00000252102 N/A N/A N/A 12.773±0.00 N/A N/A 5.296±0.00 21.797±0.00 N/A N/A 17.142±0.00 58.117±26.58 50.867±12.76 N/A
ENST00000502960 N/A 53.506±0.00 N/A 63.115±0.00 72.856±0.00 N/A 50.371±0.00 53.116±0.00 46.023±0.00 57.660±0.00 N/A N/A N/A N/A
ENST00000510680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512088 N/A N/A N/A N/A N/A N/A 27.878±0.00 36.649±0.00 18.088±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024474 ENSMUST00000007042 13.485±0.94 8.299±2.85 41.689±3.90 84.540±71.30 15.169±5.60 8.298±3.01 14.128±1.28 14.619±2.21 21.386±10.57 14.319±3.99 20.370±0.94 38.153±66.33 102.472±90.23 136.479±192.16
ENSMUSG00000042660 ENSMUST00000049323 10.037±3.41 8.188±0.95 12.805±0.23 11.023±3.49 6.648±1.64 7.038±1.52 4.468±0.42 14.264±1.80 21.715±18.86 6.511±0.44 8.088±0.39 12.177±3.99 13.374±5.95 5.345±1.38
ENSMUSG00000044595 ENSMUST00000061522 N/A 10.082±1.79 N/A 2.047±0.38 1.346±0.22 1.232±0.20 1.818±0.42 N/A 0.719±0.24 1.283±0.25 N/A 6.143±1.31 N/A 1.112±0.05
ENSMUST00000124038 N/A N/A N/A N/A N/A 0.972±0.00 N/A N/A N/A N/A N/A 1.431±0.00 N/A N/A
ENSMUST00000155827 N/A N/A N/A N/A N/A 1.045±0.00 N/A N/A N/A 0.557±0.00 N/A 1.467±0.00 N/A 1.884±1.00

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