C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: poly(A) binding protein interacting protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000120727 PAIP2 9606 + 5:139341587-139369720 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265192 PAIP2-001 139341832-139369698 protein_coding
  ENST00000394795 PAIP2-002 139342442-139369720 protein_coding
  ENST00000507415 PAIP2-006 139341919-139364042 retained_intron
  ENST00000507755 PAIP2-004 139341587-139364704 protein_coding
  ENST00000510080 PAIP2-003 139342451-139369080 protein_coding
  ENST00000510409 PAIP2-005 139341857-139365090 retained_intron
  ENST00000511381 PAIP2-007 139341862-139368798 processed_transcript
  ENST00000511706 PAIP2-008 139341878-139368933 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265192ENST00000394795ENST00000507755ENST00000510080ENST00000510409ENST00000511381ENST00000511706
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265192 N/A N/A 4.114±0.00 10.794±0.00 2.058±0.00 N/A 3.549±0.00 N/A 4.366±0.00 6.180±0.00 N/A 5.218±2.64 7.258±1.47 N/A
ENST00000394795 N/A N/A N/A N/A N/A N/A N/A 1.268±0.00 N/A N/A N/A N/A N/A N/A
ENST00000507755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.444±0.00
ENST00000510080 32.672±0.00 37.619±0.00 N/A 43.106±35.03 20.470±14.92 11.300±0.00 2.618±0.00 22.107±12.15 13.646±5.48 38.499±0.00 5.183±0.00 30.718±16.84 38.602±14.73 100.613±0.00
ENST00000510409 N/A N/A 2.438±0.00 6.451±0.00 2.841±0.00 3.605±0.00 N/A 4.021±0.00 3.557±0.00 N/A 4.095±0.00 15.727±2.95 32.162±0.00 52.562±0.00
ENST00000511381 40.806±0.00 42.734±0.00 N/A 90.562±0.00 N/A 56.535±0.00 6.582±0.00 52.026±0.00 N/A 10.215±0.00 N/A N/A N/A 98.524±0.00
ENST00000511706 30.893±0.00 30.162±0.00 N/A 91.133±0.00 39.657±0.00 44.676±0.00 N/A N/A N/A 33.355±0.00 N/A N/A N/A 75.982±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D0 CIL_0005D0_0001 CGP 5:139273752-139369720
CIL_000542 CIL_000542_0001 CGP 5:139341587-139384553

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003729 IEA mRNA binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0006417 IEA regulation of translation
GO:0007283 IEA spermatogenesis
GO:0007613 IEA memory
GO:0030371 IDA translation repressor activity
GO:0045947 IDA negative regulation of translational initiation
GO:1900271 IEA regulation of long-term synaptic potentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000037058 Paip2 polyadenylate-binding protein-interacting protein 2 protein_coding Mus_musculus

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