C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polyadenylate-binding protein-interacting protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037058 Paip2 10090 + 18:35598617-35617186 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041314 Paip2-001 35598617-35617186 protein_coding
  ENSMUST00000115734 Paip2-004 35599237-35616395 protein_coding
  ENSMUST00000115735 Paip2-005 35598649-35617183 protein_coding
  ENSMUST00000115736 Paip2-003 35598641-35616519 protein_coding
  ENSMUST00000115737 Paip2-002 35598624-35616350 protein_coding
  ENSMUST00000151126 Paip2-006 35610284-35613425 retained_intron
  ENSMUST00000152312 Paip2-007 35610985-35613874 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041314ENSMUST00000115736ENSMUST00000115737
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041314 41.940±2.30 47.582±3.64 96.887±1.09 71.816±34.06 40.704±4.19 31.132±4.71 52.129±2.91 40.931±2.65 47.984±25.45 55.438±3.81 53.192±1.69 55.497±17.97 46.706±19.87 71.490±6.58
ENSMUST00000115736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.947±5.62
ENSMUST00000115737 N/A N/A N/A 119.861±0.00 N/A N/A N/A N/A N/A N/A N/A 261.684±0.00 156.644±13.07 184.593±307.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D0 CIL_0005D0_0002 CGP 18:35562146-35617186
CIL_000542 CIL_000542_0002 CGP 18:35598617-35627244

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000900 ISO translation repressor activity, nucleic acid binding
GO:0003729 IDA mRNA binding
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0006417 IMP regulation of translation
GO:0007283 IMP spermatogenesis
GO:0007613 IMP memory
GO:0008143 ISO poly(A) binding
GO:0017148 ISO negative regulation of translation
GO:0030371 IEA translation repressor activity
GO:0045947 IEA negative regulation of translational initiation
GO:1900271 IMP regulation of long-term synaptic potentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000120727 PAIP2 poly(A) binding protein interacting protein 2 protein_coding Homo_sapiens

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