C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A) binding protein interacting protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265192 PAIP2-001 ENSG00000120727 9606 + 5:139341832-139369698 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverLungOvaryPlacentaENST00000265192
Transcript ID Bladder Brain Breast Heart Liver Lung Ovary Placenta
ENST00000265192 4.114±0.00 10.794±0.00 2.058±0.00 3.549±0.00 4.366±0.00 6.180±0.00 5.218±2.64 7.258±1.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D0 CIL_0005D0_0001 CGP 5:139273752-139369720
CIL_000542 CIL_000542_0001 CGP 5:139341587-139384553

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0030371 IDA translation repressor activity
GO:0045947 IDA negative regulation of translational initiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041314 Paip2-001 protein_coding Mus_musculus 0 1251
ENSMUST00000115735 Paip2-005 protein_coding Mus_musculus 0 1016
ENSMUST00000115736 Paip2-003 protein_coding Mus_musculus 0 989
ENSMUST00000115734 Paip2-004 protein_coding Mus_musculus 0 845
ENSMUST00000115737 Paip2-002 protein_coding Mus_musculus 0 765
ENSMUST00000151126 Paip2-006 retained_intron Mus_musculus 0 440
ENSMUST00000152312 Paip2-007 retained_intron Mus_musculus 0 414

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