Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	heparan sulfate (glucosamine) 3-O-sulfotransferase 2
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000122254	HS3ST2	9606	+	16:22814177-22916338	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000261374		HS3ST2-001	22814177-22916338	protein_coding
	ENST00000473392		HS3ST2-002	22814497-22916319	nonsense_mediated_decay

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000261374	0.586±0.00	3.533±0.00	6.652±5.53	0.946±0.00	1.422±0.00	0.542±0.00	0.257±0.00	N/A	6.879±0.00	1.007±0.00	2.521±2.72	0.862±0.55	0.478±0.37
ENST00000473392	0.140±0.00	0.377±0.00	0.138±0.00	0.278±0.15	0.471±0.00	N/A	N/A	0.047±0.00	0.868±0.72	N/A	1.307±1.60	0.426±0.00	0.248±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0008RG	CIL_0008RG_0001	VISTA	16:22372801-22973961
CIL_0000A8	CIL_0000A8_0002	CGP	16:22814177-23149270

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0000139	TAS	Golgi membrane
GO:0005975	TAS	carbohydrate metabolic process
GO:0006024	TAS	glycosaminoglycan biosynthetic process
GO:0007623	IEA	circadian rhythm
GO:0008146	IEA:TAS	sulfotransferase activity
GO:0008152	IEA	metabolic process
GO:0016021	IEA	integral component of membrane
GO:0030203	TAS	glycosaminoglycan metabolic process
GO:0033871	IEA	[heparan sulfate]-glucosamine 3-sulfotransferase 2 activity
GO:0044281	TAS	small molecule metabolic process

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000059616	hs3st2	heparan sulfate (glucosamine) 3-O-sulfotransferase 2	protein_coding	Danio_rerio
ENSMUSG00000046321	Hs3st2	heparan sulfate (glucosamine) 3-O-sulfotransferase 2	protein_coding	Mus_musculus

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