C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heparan sulfate (glucosamine) 3-O-sulfotransferase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261374 HS3ST2-001 ENSG00000122254 9606 + 16:22814177-22916338 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000261374
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000261374 0.586±0.00 3.533±0.00 6.652±5.53 0.946±0.00 1.422±0.00 0.542±0.00 0.257±0.00 6.879±0.00 1.007±0.00 2.521±2.72 0.862±0.55 0.478±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RG CIL_0008RG_0001 VISTA 16:22372801-22973961
CIL_0000A8 CIL_0000A8_0002 CGP 16:22814177-23149270

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0006024 TAS glycosaminoglycan biosynthetic process
GO:0007623 IEA circadian rhythm
GO:0008146 IEA:TAS sulfotransferase activity
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0033871 IEA [heparan sulfate]-glucosamine 3-sulfotransferase 2 activity
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084628 Hs3st2-201 protein_coding Mus_musculus 0 1746

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