C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tRNA methyltransferase 13 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122435 TRMT13 9606 + 1:100133150-100150497 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000370139 TRMT13-005 100133215-100140812 protein_coding
  ENST00000370141 TRMT13-001 100133163-100150497 protein_coding
  ENST00000370143 TRMT13-003 100133150-100140540 protein_coding
  ENST00000482437 TRMT13-002 100133165-100144567 nonsense_mediated_decay
  ENST00000493651 TRMT13-004 100142907-100144351 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000370141ENST00000482437
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000370141 0.902±0.00 0.499±0.00 0.872±0.00 0.472±0.00 1.480±0.00 1.464±0.18 2.218±0.00 0.751±0.27 1.721±0.88 1.836±0.63 0.799±0.08 3.631±1.23
ENST00000482437 N/A N/A 0.555±0.00 N/A N/A N/A N/A 1.364±0.00 1.262±0.00 1.263±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008033 IEA tRNA processing
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042701 trmt13 tRNA methyltransferase 13 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000033439 Trmt13 tRNA methyltransferase 13 protein_coding Mus_musculus

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