C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tRNA methyltransferase 13 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370141 TRMT13-001 ENSG00000122435 9606 + 1:100133163-100150497 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000370141
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000370141 0.902±0.00 0.499±0.00 0.872±0.00 0.472±0.00 1.480±0.00 1.464±0.18 2.218±0.00 0.751±0.27 1.721±0.88 1.836±0.63 0.799±0.08 3.631±1.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008033 IEA tRNA processing
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041524 Trmt13-001 protein_coding Mus_musculus 0 1616
ENSMUST00000156161 Trmt13-002 retained_intron Mus_musculus 0 955
ENSMUST00000184963 Trmt13-004 nonsense_mediated_decay Mus_musculus 0 955
ENSMUST00000183638 Trmt13-003 nonsense_mediated_decay Mus_musculus 0 896
ENSMUST00000029573 Lrrc39-001 protein_coding Mus_musculus 0 466
ENSMUST00000134761 Trmt13-007 nonsense_mediated_decay Mus_musculus 0 220

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