C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tRNA methyltransferase 13 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482437 TRMT13-002 ENSG00000122435 9606 + 1:100133165-100144567 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverLungOvaryENST00000482437
Transcript ID Bladder Liver Lung Ovary
ENST00000482437 0.555±0.00 1.364±0.00 1.262±0.00 1.263±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008033 IEA tRNA processing
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000156161 Trmt13-002 retained_intron Mus_musculus 0 551
ENSMUST00000184963 Trmt13-004 nonsense_mediated_decay Mus_musculus 0 551
ENSMUST00000041524 Trmt13-001 protein_coding Mus_musculus 0 551
ENSMUST00000183638 Trmt13-003 nonsense_mediated_decay Mus_musculus 0 549
ENSMUST00000134761 Trmt13-007 nonsense_mediated_decay Mus_musculus 0 220

Loading