C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: septin 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122545 SEPT7 9606 + 7:35800932-35907105 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000350320 SEPT7-201 35800986-35907105 protein_coding
  ENST00000399034 SEPT7-202 35800986-35907105 protein_coding
  ENST00000399035 SEPT7-203 35832669-35907105 protein_coding
  ENST00000425198 SEPT7-003 35832798-35905305 nonsense_mediated_decay
  ENST00000432293 SEPT7-204 35879916-35905305 protein_coding
  ENST00000435235 SEPT7-001 35800932-35905307 protein_coding
  ENST00000473201 SEPT7-006 35863552-35874118 retained_intron
  ENST00000475109 SEPT7-007 35801219-35879940 processed_transcript
  ENST00000485569 SEPT7-010 35890744-35903189 processed_transcript
  ENST00000492940 SEPT7-009 35890518-35898527 retained_intron
  ENST00000493626 SEPT7-002 35801219-35832845 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399035ENST00000425198ENST00000432293ENST00000435235ENST00000475109ENST00000492940
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399035 N/A N/A N/A 13.095±0.00 N/A N/A N/A N/A N/A N/A 0.621±0.00 N/A N/A N/A
ENST00000425198 N/A N/A 1.162±0.00 4.003±0.00 3.486±0.00 2.119±0.00 1.471±0.00 1.298±0.00 2.706±0.00 4.763±0.00 0.257±0.00 2.269±0.00 N/A N/A
ENST00000432293 17.090±0.00 29.796±0.00 N/A 42.100±0.00 16.851±0.00 16.004±9.69 15.484±0.00 20.230±0.00 8.308±0.33 30.828±0.00 9.875±0.00 23.523±0.08 11.109±0.00 28.870±0.00
ENST00000435235 30.758±0.00 N/A 4.519±0.00 71.796±29.80 16.127±0.00 11.705±0.26 8.877±0.00 5.225±0.00 19.386±0.00 12.527±3.31 1.687±0.00 34.929±11.88 36.426±9.44 49.937±0.00
ENST00000475109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.934±0.00 N/A N/A N/A
ENST00000492940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.812±0.00 79.513±0.00 77.095±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091L CIL_00091L_0001 VISTA 7:35251004-35852019
CIL_0005M2 CIL_0005M2_0001 CGP 7:35632659-35907105
CIL_0001SS CIL_0001SS_0001 CGP 7:35800932-36301543

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0000910 TAS cytokinesis
GO:0001725 IDA stress fiber
GO:0005198 TAS structural molecule activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005930 ISS axoneme
GO:0005938 IEA cell cortex
GO:0007049 IEA cell cycle
GO:0007067 IEA mitotic nuclear division
GO:0015629 IDA actin cytoskeleton
GO:0015630 IDA microtubule cytoskeleton
GO:0016324 ISS apical plasma membrane
GO:0016476 ISS regulation of embryonic cell shape
GO:0031105 IEA septin complex
GO:0042802 IPI identical protein binding
GO:0043679 IEA axon terminus
GO:0045202 IEA synapse
GO:0051291 IDA protein heterooligomerization
GO:0060271 ISS cilium morphogenesis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075198 SEPT7 (2 of 2) septin 7 protein_coding Danio_rerio
ENSMUSG00000001833 Sept7 septin 7 protein_coding Mus_musculus

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