C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399034 SEPT7-202 ENSG00000122545 9606 + 7:35800986-35907105 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091L CIL_00091L_0001 VISTA 7:35251004-35852019
CIL_0005M2 CIL_0005M2_0001 CGP 7:35632659-35907105
CIL_0001SS CIL_0001SS_0001 CGP 7:35800932-36301543

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0000910 TAS cytokinesis
GO:0001725 IDA stress fiber
GO:0005198 TAS structural molecule activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005930 ISS axoneme
GO:0005938 IEA cell cortex
GO:0007049 IEA cell cycle
GO:0007067 IEA mitotic nuclear division
GO:0015629 IDA actin cytoskeleton
GO:0015630 IDA microtubule cytoskeleton
GO:0016324 ISS apical plasma membrane
GO:0016476 ISS regulation of embryonic cell shape
GO:0031105 IEA septin complex
GO:0042802 IPI identical protein binding
GO:0043679 IEA axon terminus
GO:0045202 IEA synapse
GO:0051291 IDA protein heterooligomerization
GO:0060271 ISS cilium morphogenesis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165594 Sept7-202 protein_coding Mus_musculus 0 3208
ENSMUST00000115272 Sept7-201 protein_coding Mus_musculus 0 3208
ENSDART00000074575 SEPT7 (1 of 2)-201 protein_coding Danio_rerio 0 697
ENSDART00000148631 SEPT7 (1 of 2)-001 protein_coding Danio_rerio 0 697
ENSDART00000150132 SEPT7 (1 of 2)-002 protein_coding Danio_rerio 0 363
ENSDART00000149771 SEPT7 (1 of 2)-003 retained_intron Danio_rerio 5.99994e-41 174

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