C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5'-nucleotidase, cytosolic IIIA
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396152 NT5C3A-004 ENSG00000122643 9606 - 7:33014139-33041155 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartMuscleOvaryENST00000396152
Transcript ID Bladder Brain Breast Colon Heart Muscle Ovary
ENST00000396152 0.583±0.00 0.456±0.00 0.676±0.00 4.291±0.00 0.320±0.00 1.556±0.00 3.007±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FA CIL_0003FA_0001 CGP 7:32957404-33062797

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA:NAS magnesium ion binding
GO:0005737 IDA:IEA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005829 TAS cytosol
GO:0006206 TAS pyrimidine nucleobase metabolic process
GO:0006213 NAS pyrimidine nucleoside metabolic process
GO:0008253 IDA:IEA 5'-nucleotidase activity
GO:0008665 TAS 2'-phosphotransferase activity
GO:0009117 IEA nucleotide metabolic process
GO:0016311 IEA dephosphorylation
GO:0044281 TAS small molecule metabolic process
GO:0046135 TAS pyrimidine nucleoside catabolic process
GO:0055086 TAS nucleobase-containing small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101367 Nt5c3-003 protein_coding Mus_musculus 0 1050
ENSMUST00000152447 Nt5c3-002 nonsense_mediated_decay Mus_musculus 0 1018
ENSMUST00000031793 Nt5c3-001 protein_coding Mus_musculus 0 952
ENSMUST00000135558 Nt5c3-006 processed_transcript Mus_musculus 0 907
ENSMUST00000134577 Nt5c3-007 processed_transcript Mus_musculus 0 204
ENSMUST00000138647 Nt5c3-005 processed_transcript Mus_musculus 2.8026e-45 187

Loading