C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5'-nucleotidase, cytosolic IIIA
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000242210 NT5C3A-001 ENSG00000122643 9606 - 7:33014148-33062797 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverOvaryPlacentaTestisENST00000242210
Transcript ID Adipose Adrenal Brain Breast Heart Liver Ovary Placenta Testis
ENST00000242210 3.491±0.00 1.400±0.00 0.851±0.00 1.866±0.00 0.903±0.00 0.891±0.00 4.138±2.17 0.876±0.31 1.483±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FA CIL_0003FA_0001 CGP 7:32957404-33062797

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA:NAS magnesium ion binding
GO:0005737 IDA:IEA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005829 TAS cytosol
GO:0006206 TAS pyrimidine nucleobase metabolic process
GO:0006213 NAS pyrimidine nucleoside metabolic process
GO:0008253 IDA:IEA 5'-nucleotidase activity
GO:0008665 TAS 2'-phosphotransferase activity
GO:0009117 IEA nucleotide metabolic process
GO:0016311 IEA dephosphorylation
GO:0044281 TAS small molecule metabolic process
GO:0046135 TAS pyrimidine nucleoside catabolic process
GO:0055086 TAS nucleobase-containing small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031793 Nt5c3-001 protein_coding Mus_musculus 0 1116
ENSMUST00000152447 Nt5c3-002 nonsense_mediated_decay Mus_musculus 0 948
ENSMUST00000101367 Nt5c3-003 protein_coding Mus_musculus 0 948
ENSMUST00000135558 Nt5c3-006 processed_transcript Mus_musculus 0 911
ENSMUST00000138647 Nt5c3-005 processed_transcript Mus_musculus 2.8026e-45 187
ENSMUST00000134577 Nt5c3-007 processed_transcript Mus_musculus 1e-29 135

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