C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carbohydrate (chondroitin 6) sulfotransferase 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122863 CHST3 9606 + 10:71964365-72013564 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373115 CHST3-001 71964365-72013564 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373115
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373115 8.080±0.00 4.506±0.00 1.817±0.00 5.021±4.11 8.625±0.00 4.530±3.67 4.462±3.03 3.601±3.09 2.293±1.49 3.699±1.98 3.561±0.08 10.524±6.80 7.902±2.04 13.344±1.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VS CIL_0007VS_0001 VISTA 10:71953326-72556599

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS:IEA Golgi membrane
GO:0005975 TAS:IEA carbohydrate metabolic process
GO:0006790 IDA sulfur compound metabolic process
GO:0008146 TAS:IEA sulfotransferase activity
GO:0008459 IDA chondroitin 6-sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030204 TAS chondroitin sulfate metabolic process
GO:0030206 IDA chondroitin sulfate biosynthetic process
GO:0043029 IEA T cell homeostasis
GO:0044281 TAS small molecule metabolic process
GO:0050698 IEA proteoglycan sulfotransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061070 chst3a carbohydrate (chondroitin 6) sulfotransferase 3a protein_coding Danio_rerio
ENSDARG00000077844 chst3b carbohydrate (chondroitin 6) sulfotransferase 3b protein_coding Danio_rerio
ENSMUSG00000057337 Chst3 carbohydrate (chondroitin 6/keratan) sulfotransferase 3 protein_coding Mus_musculus

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