C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: autophagy related 101
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000123395 ATG101 9606 + 12:52069246-52077494 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000336854 ATG101-001 52069971-52077494 protein_coding
  ENST00000547409 ATG101-003 52069246-52070415 processed_transcript
  ENST00000548915 ATG101-007 52070020-52076956 protein_coding
  ENST00000550604 ATG101-005 52069987-52073903 protein_coding
  ENST00000552544 ATG101-004 52069976-52073903 retained_intron
  ENST00000552947 ATG101-002 52070012-52071434 retained_intron
  ENST00000553049 ATG101-006 52070003-52077104 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000336854ENST00000548915ENST00000550604ENST00000552544ENST00000552947
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000336854 1.968±0.00 3.689±0.00 1.686±0.00 4.733±2.42 1.946±0.01 0.796±0.00 1.666±0.00 2.630±0.00 2.786±0.05 4.537±0.00 1.537±0.84 7.030±3.08 7.053±0.90 10.246±0.00
ENST00000548915 8.110±0.00 16.810±0.00 N/A 9.815±0.00 10.385±0.00 14.768±0.00 8.461±0.00 21.164±0.00 11.657±0.00 22.066±0.00 6.479±0.00 20.311±0.72 18.238±4.99 26.833±0.00
ENST00000550604 N/A N/A N/A N/A N/A 2.149±0.00 N/A 4.596±0.00 2.078±0.00 N/A 5.487±0.15 N/A N/A N/A
ENST00000552544 N/A N/A N/A 6.614±0.00 4.531±0.00 N/A N/A N/A 1.913±0.00 2.430±0.00 N/A 2.097±0.00 6.650±0.00 11.631±0.00
ENST00000552947 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.054±0.00 N/A 0.804±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JQ CIL_0006JQ_0001 CGP 12:52022832-52077494
CIL_0006JR CIL_0006JR_0001 CGP 12:52069246-52192000

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000045 IMP autophagic vacuole assembly
GO:0000407 IDA pre-autophagosomal structure
GO:0005515 IPI protein binding
GO:0032403 IPI protein complex binding
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043287 ATG101 autophagy related 101 protein_coding Danio_rerio
ENSMUSG00000037204 Atg101 autophagy related 101 protein_coding Mus_musculus

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