C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autophagy related 101
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336854 ATG101-001 ENSG00000123395 9606 + 12:52069971-52077494 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000336854
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000336854 1.968±0.00 3.689±0.00 1.686±0.00 4.733±2.42 1.946±0.01 0.796±0.00 1.666±0.00 2.630±0.00 2.786±0.05 4.537±0.00 1.537±0.84 7.030±3.08 7.053±0.90 10.246±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JQ CIL_0006JQ_0001 CGP 12:52022832-52077494
CIL_0006JR CIL_0006JR_0001 CGP 12:52069246-52192000

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000045 IMP autophagic vacuole assembly
GO:0000407 IDA pre-autophagosomal structure
GO:0005515 IPI protein binding
GO:0032403 IPI protein complex binding
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048393 Atg101-201 protein_coding Mus_musculus 0 904

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