C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006JR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123395-ENSG00000167767 CGP 9606 12:52069246-52192000
GeneTranscriptPositionBiotype
ENSG00000123395 (ATG101)
autophagy related 101 		ENST00000336854 (ATG101-001) 52069971-52077494 protein_coding
ENST00000547409 (ATG101-003) 52069246-52070415 processed_transcript
ENST00000548915 (ATG101-007) 52070020-52076956 protein_coding
ENST00000550604 (ATG101-005) 52069987-52073903 protein_coding
ENST00000552544 (ATG101-004) 52069976-52073903 retained_intron
ENST00000552947 (ATG101-002) 52070012-52071434 retained_intron
ENST00000553049 (ATG101-006) 52070003-52077104 protein_coding
ENSG00000167767 (KRT80)
keratin 80 		ENST00000313234 (KRT80-001) 52168996-52192000 protein_coding
ENST00000394815 (KRT80-002) 52168996-52192000 protein_coding
ENST00000466011 (KRT80-003) 52169523-52185749 retained_intron
ENSG00000257542 (OR7E47P)
olfactory receptor, family 7, subfamily E, member 47 pseudogene 		ENST00000546390 (OR7E47P-002) 52079696-52108239 processed_transcript
ENST00000546981 (OR7E47P-003) 52093569-52108250 processed_transcript
ENST00000548970 (OR7E47P-001) 52107278-52108261 transcribed_unprocessed_pseudogene
ENSG00000257663 (RP11-1100L3.7)
 ENST00000550301 (RP11-1100L3.7-001) 52076841-52082084 antisense
ENSG00000257989 (RP1-288H2.2)
 ENST00000547538 (RP1-288H2.2-001) 52092485-52104297 lincRNA
ENSG00000265009 (AC078864.1)
 ENST00000582209 (AC078864.1-201) 52110634-52110704 miRNA
ENSG00000272724 (OR7E47P)
olfactory receptor, family 7, subfamily E, member 47 pseudogene 		ENST00000575924 (OR7E47P-001) 52084744-52092285 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0006JR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037204-ENSMUSG00000037185 CGP 10090 15:101284301-101370125
GeneTranscriptPositionBiotype
ENSMUSG00000037185 (Krt80)
keratin 80 		ENSMUST00000077196 (Krt80-201) 101349571-101370125 protein_coding
ENSMUSG00000037204 (Atg101)
autophagy related 101 		ENSMUST00000048393 (Atg101-201) 101284301-101290934 protein_coding
ENSMUSG00000075408 (6030408B16Rik)
RIKEN cDNA 6030408B16 gene 		ENSMUST00000071328 (6030408B16Rik-201) 101293212-101296615 lincRNA
ENSMUST00000191426 (6030408B16Rik-001) 101293232-101297426 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JR_0001ENSG00000123395ENST00000336854ENST00000547409ENST00000548915ENST00000550604ENST00000552544ENST00000552947ENST00000553049ENSG00000167767ENST00000313234ENST00000394815ENST00000466011ENSG00000257542ENST00000546390ENST00000546981ENST00000548970ENSG00000257663ENST00000550301ENSG00000257989ENST00000547538ENSG00000265009ENST00000582209ENSG00000272724ENST00000575924CIL_0006JR_0002ENSMUSG00000037185ENSMUST00000077196ENSMUSG00000037204ENSMUST00000048393ENSMUSG00000075408ENSMUST00000071328ENSMUST00000191426
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JR_0001ENSG00000123395ENST00000336854ENST00000548915ENST00000550604ENST00000552544ENST00000552947ENSG00000167767ENST00000313234ENST00000394815ENST00000466011ENSG00000257542ENST00000546390ENST00000546981ENST00000548970ENSG00000257663ENST00000550301ENSG00000257989ENST00000547538ENSG00000265009ENST00000582209ENSG00000272724ENST00000575924CIL_0006JR_0002ENSMUSG00000037185ENSMUST00000077196ENSMUSG00000037204ENSMUST00000048393ENSMUSG00000075408ENSMUST00000071328ENSMUST00000191426
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123395 ENST00000336854 1.968±0.00 3.689±0.00 1.686±0.00 4.733±2.42 1.946±0.01 0.796±0.00 1.666±0.00 2.630±0.00 2.786±0.05 4.537±0.00 1.537±0.84 7.030±3.08 7.053±0.90 10.246±0.00
ENST00000547409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548915 8.110±0.00 16.810±0.00 N/A 9.815±0.00 10.385±0.00 14.768±0.00 8.461±0.00 21.164±0.00 11.657±0.00 22.066±0.00 6.479±0.00 20.311±0.72 18.238±4.99 26.833±0.00
ENST00000550604 N/A N/A N/A N/A N/A 2.149±0.00 N/A 4.596±0.00 2.078±0.00 N/A 5.487±0.15 N/A N/A N/A
ENST00000552544 N/A N/A N/A 6.614±0.00 4.531±0.00 N/A N/A N/A 1.913±0.00 2.430±0.00 N/A 2.097±0.00 6.650±0.00 11.631±0.00
ENST00000552947 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.054±0.00 N/A 0.804±0.00 N/A N/A
ENST00000553049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167767 ENST00000313234 N/A N/A 0.138±0.00 N/A N/A 0.081±0.00 N/A 1.063±0.00 N/A N/A N/A 1.530±1.85 5.272±2.74 0.182±0.00
ENST00000394815 0.145±0.00 0.042±0.00 N/A 0.024±0.00 1.369±0.00 N/A N/A N/A 0.051±0.00 N/A 0.262±0.00 0.651±0.04 6.398±2.05 0.515±0.00
ENST00000466011 N/A N/A N/A 0.043±0.00 0.176±0.00 0.013±0.00 0.053±0.02 0.127±0.00 N/A N/A N/A 0.974±0.00 N/A N/A
ENSG00000257542 ENST00000546390 N/A N/A N/A 0.357±0.00 N/A 0.471±0.22 0.111±0.00 0.390±0.00 0.553±0.00 8.518±6.90 0.077±0.00 1.206±0.83 0.341±0.31 5.848±5.55
ENST00000546981 0.034±0.00 N/A N/A 0.183±0.00 0.138±0.00 0.805±0.00 0.118±0.00 N/A 0.128±0.00 1.647±0.00 3.045±0.00 0.712±0.50 0.558±0.00 N/A
ENST00000548970 N/A N/A 4.538±0.00 N/A N/A N/A N/A 0.866±0.46 N/A N/A N/A N/A N/A 1.520±0.00
ENSG00000257663 ENST00000550301 9.263±0.00 18.840±0.00 1.173±0.00 9.930±2.86 8.688±5.25 12.342±8.17 8.650±7.00 19.259±14.11 13.518±11.14 19.937±18.09 11.684±7.27 21.898±9.91 24.920±7.29 30.006±4.17
ENSG00000257989 ENST00000547538 0.026±0.00 0.108±0.00 N/A 0.165±0.00 0.054±0.00 0.199±0.00 0.025±0.00 N/A N/A 0.075±0.00 N/A 0.068±0.00 N/A 0.157±0.00
ENSG00000265009 ENST00000582209 N/A N/A N/A N/A N/A N/A N/A 0.779±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000272724 ENST00000575924 N/A 0.036±0.00 N/A N/A 0.230±0.00 0.033±0.00 N/A N/A N/A 0.653±0.00 N/A 0.121±0.02 N/A 0.566±0.36
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037185 ENSMUST00000077196 N/A 0.267±0.08 0.428±0.00 1.219±1.67 N/A N/A N/A N/A 0.055±0.05 N/A 0.315±0.17 1.767±1.30 6.882±0.78 0.133±0.08
ENSMUSG00000037204 ENSMUST00000048393 16.750±1.69 19.888±1.88 21.598±5.56 25.711±4.70 14.093±4.19 30.594±1.42 12.082±1.30 20.557±2.95 21.498±6.03 18.580±2.73 22.218±2.61 23.002±5.49 22.615±2.84 8.187±1.50
ENSMUSG00000075408 ENSMUST00000071328 8.171±6.67 1.102±0.16 0.945±0.02 0.124±0.04 0.132±0.05 0.182±0.05 1.418±0.97 0.036±0.00 0.187±0.16 15.800±6.03 0.156±0.08 7.081±4.24 0.282±0.22 4.227±0.76
ENSMUST00000191426 1.393±0.88 0.248±0.00 0.145±0.00 0.108±0.07 0.294±0.12 0.116±0.01 0.418±0.08 0.131±0.06 0.063±0.04 3.705±0.63 0.062±0.00 1.837±1.04 0.039±0.02 N/A

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