C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase mitochondrial F1 complex assembly factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000534216 ATPAF1-011 ENSG00000123472 9606 - 1:46635634-46658727 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000534216
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000534216 4.788±0.00 6.102±0.00 23.166±0.00 6.114±0.00 5.766±0.00 20.368±0.00 13.387±0.00 6.884±0.00 8.108±0.00 20.735±0.00 6.372±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0006461 IEA protein complex assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000184179 Atpaf1-002 nonsense_mediated_decay Mus_musculus 0 676
ENSMUST00000176047 Atpaf1-001 protein_coding Mus_musculus 0 676
ENSMUST00000175725 Atpaf1-004 protein_coding Mus_musculus 0 662
ENSMUST00000122417 Gm14117-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000137401 Atpaf1-003 nonsense_mediated_decay Mus_musculus 0 335
ENSMUST00000176192 Atpaf1-005 protein_coding Mus_musculus 0 292

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