C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase mitochondrial F1 complex assembly factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000574428 ATPAF1-012 ENSG00000123472 9606 - 1:46635045-46668364 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000574428
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000574428 7.859±0.00 9.946±0.00 2.933±0.00 10.041±6.62 10.851±7.33 37.154±29.52 8.340±0.00 9.565±6.10 1.680±0.21 11.733±4.44 5.269±2.41 11.567±3.46 25.348±11.90

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0006461 IEA protein complex assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176047 Atpaf1-001 protein_coding Mus_musculus 0 1288
ENSMUST00000184179 Atpaf1-002 nonsense_mediated_decay Mus_musculus 0 1122
ENSMUST00000122417 Gm14117-001 processed_pseudogene Mus_musculus 0 1072
ENSMUST00000175725 Atpaf1-004 protein_coding Mus_musculus 0 1011
ENSMUST00000137401 Atpaf1-003 nonsense_mediated_decay Mus_musculus 0 335
ENSMUST00000176192 Atpaf1-005 protein_coding Mus_musculus 0 316

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