C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 36 (proton/amino acid symporter), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000123643 SLC36A1 9606 + 5:151437046-151492381 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000243389 SLC36A1-001 151447596-151492381 protein_coding
  ENST00000429484 SLC36A1-004 151437086-151470959 protein_coding
  ENST00000517628 SLC36A1-003 151473673-151480144 protein_coding
  ENST00000517945 SLC36A1-009 151447627-151463620 protein_coding
  ENST00000519829 SLC36A1-010 151450923-151463624 protein_coding
  ENST00000520111 SLC36A1-008 151437046-151464578 protein_coding
  ENST00000520701 SLC36A1-007 151437047-151488690 protein_coding
  ENST00000521351 SLC36A1-011 151447801-151465149 processed_transcript
  ENST00000521925 SLC36A1-002 151447627-151479759 protein_coding
  ENST00000522185 SLC36A1-012 151476589-151488269 nonsense_mediated_decay
  ENST00000616007 SLC36A1-201 151447614-151480143 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000243389ENST00000429484ENST00000520701ENST00000521351
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000243389 2.533±0.00 2.073±0.00 0.525±0.00 0.684±0.00 1.215±0.50 3.126±0.00 1.058±0.00 1.575±1.21 0.885±0.00 0.792±0.16 0.799±0.00 1.524±0.63 2.257±0.17 1.827±0.90
ENST00000429484 N/A N/A 0.474±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520701 N/A N/A N/A N/A N/A N/A 0.173±0.00 N/A 1.083±0.00 N/A N/A N/A N/A N/A
ENST00000521351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.763±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KX CIL_0001KX_0001 CGP 5:151314978-151492381
CIL_0001UB CIL_0001UB_0001 CGP 5:151437046-151568944

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005280 IEA hydrogen:amino acid symporter activity
GO:0005764 IEA lysosome
GO:0005765 IDA lysosomal membrane
GO:0005783 IDA endoplasmic reticulum
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006865 TAS amino acid transport
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015180 IEA L-alanine transmembrane transporter activity
GO:0015187 IEA glycine transmembrane transporter activity
GO:0015193 IEA L-proline transmembrane transporter activity
GO:0015293 IEA symporter activity
GO:0015804 IEA neutral amino acid transport
GO:0015808 IEA L-alanine transport
GO:0015816 IEA glycine transport
GO:0015824 IEA proline transport
GO:0015992 IEA proton transport
GO:0016021 IEA integral component of membrane
GO:0035524 IEA proline transmembrane transport
GO:0055085 TAS transmembrane transport
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075618 slc36a1 solute carrier family 36 (proton/amino acid symporter), member 1 protein_coding Danio_rerio
ENSMUSG00000020261 Slc36a1 solute carrier family 36 (proton/amino acid symporter), member 1 protein_coding Mus_musculus

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