C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001UB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123643-ENSG00000086570 CGP 9606 5:151437046-151568944
GeneTranscriptPositionBiotype
ENSG00000086570 (FAT2)
FAT atypical cadherin 2 		ENST00000261800 (FAT2-001) 151504094-151568944 protein_coding
ENST00000520200 (FAT2-002) 151504093-151531972 protein_coding
ENSG00000123643 (SLC36A1)
solute carrier family 36 (proton/amino acid symporter), member 1 		ENST00000243389 (SLC36A1-001) 151447596-151492381 protein_coding
ENST00000429484 (SLC36A1-004) 151437086-151470959 protein_coding
ENST00000517628 (SLC36A1-003) 151473673-151480144 protein_coding
ENST00000517945 (SLC36A1-009) 151447627-151463620 protein_coding
ENST00000519829 (SLC36A1-010) 151450923-151463624 protein_coding
ENST00000520111 (SLC36A1-008) 151437046-151464578 protein_coding
ENST00000520701 (SLC36A1-007) 151437047-151488690 protein_coding
ENST00000521351 (SLC36A1-011) 151447801-151465149 processed_transcript
ENST00000521925 (SLC36A1-002) 151447627-151479759 protein_coding
ENST00000522185 (SLC36A1-012) 151476589-151488269 nonsense_mediated_decay
ENST00000616007 (SLC36A1-201) 151447614-151480143 protein_coding
ENSG00000271795 (CTC-251D13.1)
 ENST00000606930 (CTC-251D13.1-001) 151509453-151512769 antisense
CIL_0001UB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020261-ENSMUSG00000055333 CGP 10090 11:55204350-55336564
GeneTranscriptPositionBiotype
ENSMUSG00000020261 (Slc36a1)
solute carrier family 36 (proton/amino acid symporter), member 1 		ENSMUST00000020499 (Slc36a1-201) 55204376-55233837 protein_coding
ENSMUST00000108867 (Slc36a1-002) 55213795-55232681 protein_coding
ENSMUST00000108872 (Slc36a1-001) 55204350-55236330 protein_coding
ENSMUST00000147506 (Slc36a1-003) 55204374-55222074 protein_coding
ENSMUST00000152336 (Slc36a1-004) 55204362-55214262 processed_transcript
ENSMUSG00000055333 (Fat2)
FAT tumor suppressor homolog 2 (Drosophila) 		ENSMUST00000068853 (Fat2-001) 55250609-55336564 protein_coding
ENSMUST00000108864 (Fat2-201) 55250610-55312257 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UB_0001ENSG00000086570ENST00000261800ENST00000520200ENSG00000123643ENST00000243389ENST00000429484ENST00000517628ENST00000517945ENST00000519829ENST00000520111ENST00000520701ENST00000521351ENST00000521925ENST00000522185ENST00000616007ENSG00000271795ENST00000606930CIL_0001UB_0002ENSMUSG00000020261ENSMUST00000020499ENSMUST00000108867ENSMUST00000108872ENSMUST00000147506ENSMUST00000152336ENSMUSG00000055333ENSMUST00000068853ENSMUST00000108864
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UB_0001ENSG00000086570ENST00000261800ENST00000520200ENSG00000123643ENST00000243389ENST00000429484ENST00000520701ENST00000521351ENSG00000271795ENST00000606930CIL_0001UB_0002ENSMUSG00000020261ENSMUST00000020499ENSMUST00000108867ENSMUST00000108872ENSMUST00000152336ENSMUSG00000055333ENSMUST00000068853ENSMUST00000108864
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000086570 ENST00000261800 N/A N/A N/A N/A 0.718±0.00 N/A N/A 0.005±0.00 0.142±0.00 N/A N/A N/A 0.745±0.00 0.291±0.00
ENST00000520200 N/A N/A N/A N/A 2.172±0.00 N/A 0.017±0.00 0.150±0.11 0.016±0.00 0.145±0.00 N/A 0.355±0.00 0.879±0.30 1.205±0.00
ENSG00000123643 ENST00000243389 2.533±0.00 2.073±0.00 0.525±0.00 0.684±0.00 1.215±0.50 3.126±0.00 1.058±0.00 1.575±1.21 0.885±0.00 0.792±0.16 0.799±0.00 1.524±0.63 2.257±0.17 1.827±0.90
ENST00000429484 N/A N/A 0.474±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520701 N/A N/A N/A N/A N/A N/A 0.173±0.00 N/A 1.083±0.00 N/A N/A N/A N/A N/A
ENST00000521351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.763±0.00 N/A N/A N/A
ENST00000521925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271795 ENST00000606930 0.114±0.00 0.180±0.00 N/A 0.127±0.00 N/A N/A 0.014±0.00 N/A N/A 0.077±0.00 0.092±0.05 0.152±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020261 ENSMUST00000020499 N/A 3.099±0.25 N/A N/A 4.475±0.00 N/A N/A N/A N/A N/A N/A 2.389±0.45 N/A 3.743±0.57
ENSMUST00000108867 N/A 5.090±0.00 N/A N/A N/A 14.055±1.68 N/A N/A N/A N/A N/A 3.595±0.00 N/A 2.255±0.00
ENSMUST00000108872 6.047±2.04 6.424±0.85 7.063±0.35 5.908±0.89 5.785±2.93 22.290±1.44 2.820±0.69 22.893±1.60 8.283±2.20 6.523±1.06 1.173±0.37 4.760±1.54 6.879±2.92 2.208±0.06
ENSMUST00000147506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.627±0.00 N/A N/A
ENSMUSG00000055333 ENSMUST00000068853 0.000±0.00 N/A N/A N/A 0.171±0.00 0.071±0.01 N/A N/A 0.000±0.00 0.306±0.10 0.002±0.00 N/A 0.002±0.00 N/A
ENSMUST00000108864 0.047±0.04 0.010±0.00 4.687±1.19 0.048±0.03 0.172±0.07 0.103±0.02 0.039±0.02 0.038±0.01 0.004±0.00 0.328±0.06 0.018±0.01 0.061±0.02 0.051±0.06 0.015±0.01

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