C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 36 (proton/amino acid symporter), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020261 Slc36a1 10090 + 11:55204350-55236330 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020499 Slc36a1-201 55204376-55233837 protein_coding
  ENSMUST00000108867 Slc36a1-002 55213795-55232681 protein_coding
  ENSMUST00000108872 Slc36a1-001 55204350-55236330 protein_coding
  ENSMUST00000147506 Slc36a1-003 55204374-55222074 protein_coding
  ENSMUST00000152336 Slc36a1-004 55204362-55214262 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020499ENSMUST00000108867ENSMUST00000108872ENSMUST00000152336
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020499 N/A 3.099±0.25 N/A N/A 4.475±0.00 N/A N/A N/A N/A N/A N/A 2.389±0.45 N/A 3.743±0.57
ENSMUST00000108867 N/A 5.090±0.00 N/A N/A N/A 14.055±1.68 N/A N/A N/A N/A N/A 3.595±0.00 N/A 2.255±0.00
ENSMUST00000108872 6.047±2.04 6.424±0.85 7.063±0.35 5.908±0.89 5.785±2.93 22.290±1.44 2.820±0.69 22.893±1.60 8.283±2.20 6.523±1.06 1.173±0.37 4.760±1.54 6.879±2.92 2.208±0.06
ENSMUST00000152336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.627±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KX CIL_0001KX_0002 CGP 11:55158470-55236330
CIL_0001UB CIL_0001UB_0002 CGP 11:55204350-55336564

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005280 IDA hydrogen:amino acid symporter activity
GO:0005764 ISA lysosome
GO:0005765 IEA lysosomal membrane
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015180 IDA L-alanine transmembrane transporter activity
GO:0015187 IDA glycine transmembrane transporter activity
GO:0015193 IDA L-proline transmembrane transporter activity
GO:0015804 IEA neutral amino acid transport
GO:0015808 IDA L-alanine transport
GO:0015816 IDA glycine transport
GO:0015824 IDA proline transport
GO:0015992 IDA proton transport
GO:0016021 IEA integral component of membrane
GO:0035524 IDA proline transmembrane transport
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075618 slc36a1 solute carrier family 36 (proton/amino acid symporter), member 1 protein_coding Danio_rerio
ENSG00000123643 SLC36A1 solute carrier family 36 (proton/amino acid symporter), member 1 protein_coding Homo_sapiens

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