C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAP2C, member of RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000123728 RAP2C 9606 - X:132203024-132219480 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342983 RAP2C-001 132203025-132218124 protein_coding
  ENST00000370874 RAP2C-002 132204650-132219433 protein_coding
  ENST00000460462 RAP2C-003 132205449-132218332 processed_transcript
  ENST00000490400 RAP2C-004 132217666-132219443 processed_transcript
  ENST00000620646 RAP2C-201 132203024-132219480 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342983ENST00000370874ENST00000460462ENST00000620646
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342983 6.606±0.00 N/A N/A 3.097±1.80 3.477±0.00 2.441±1.17 2.391±0.00 2.974±0.93 4.044±2.09 6.227±0.00 1.688±1.07 3.404±2.62 4.488±1.78 2.424±0.17
ENST00000370874 N/A N/A 1.095±0.00 0.825±0.00 N/A N/A 0.446±0.00 N/A N/A 0.972±0.00 N/A 1.186±0.00 N/A N/A
ENST00000460462 N/A N/A N/A N/A N/A N/A N/A N/A 2.655±0.00 N/A N/A 13.525±0.00 11.792±0.00 7.617±0.00
ENST00000620646 N/A 2.715±0.00 1.399±0.00 N/A N/A N/A N/A 1.995±0.73 1.472±0.00 N/A N/A 2.253±0.20 1.972±1.33 2.599±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000T1 CIL_0000T1_0001 CGP X:132076993-132219480
CIL_0000GI CIL_0000GI_0002 CGP X:132203024-132489968

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003713 IDA transcription coactivator activity
GO:0003924 IEA GTPase activity
GO:0005525 IDA:IEA GTP binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0005829 IEA cytosol
GO:0005886 IDA plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0019003 IDA GDP binding
GO:0030336 ISS negative regulation of cell migration
GO:0031954 ISS positive regulation of protein autophosphorylation
GO:0032486 ISS Rap protein signal transduction
GO:0055037 IEA recycling endosome
GO:0055038 ISS recycling endosome membrane
GO:0061097 ISS regulation of protein tyrosine kinase activity
GO:0070062 IDA extracellular vesicular exosome
GO:2001141 IDA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015649 rap2c RAP2C, member of RAS oncogene family protein_coding Danio_rerio
ENSMUSG00000050029 Rap2c RAP2C, member of RAS oncogene family protein_coding Mus_musculus

Loading