C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000T1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165694-ENSG00000123728 CGP 9606 X:132076993-132219480
GeneTranscriptPositionBiotype
ENSG00000123728 (RAP2C)
RAP2C, member of RAS oncogene family 		ENST00000342983 (RAP2C-001) 132203025-132218124 protein_coding
ENST00000370874 (RAP2C-002) 132204650-132219433 protein_coding
ENST00000460462 (RAP2C-003) 132205449-132218332 processed_transcript
ENST00000490400 (RAP2C-004) 132217666-132219443 processed_transcript
ENST00000620646 (RAP2C-201) 132203024-132219480 protein_coding
ENSG00000165694 (FRMD7)
FERM domain containing 7 		ENST00000298542 (FRMD7-002) 132076995-132128020 protein_coding
ENST00000370879 (FRMD7-001) 132076993-132094263 protein_coding
ENST00000464296 (FRMD7-003) 132077872-132127844 protein_coding
ENSG00000228819 (RP1-305B16.3)
 ENST00000424708 (RP1-305B16.3-001) 132130091-132131352 processed_pseudogene
CIL_0000T1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036131-ENSMUSG00000050029 CGP 10090 X:50895180-51018018
GeneTranscriptPositionBiotype
ENSMUSG00000036131 (Frmd7)
FERM domain containing 7 		ENSMUST00000060650 (Frmd7-001) 50895180-50942710 protein_coding
ENSMUST00000164311 (Frmd7-002) 50895180-50942710 nonsense_mediated_decay
ENSMUSG00000050029 (Rap2c)
RAP2C, member of RAS oncogene family 		ENSMUST00000053593 (Rap2c-001) 51003912-51018018 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000T1_0001ENSG00000123728ENST00000342983ENST00000370874ENST00000460462ENST00000490400ENST00000620646ENSG00000165694ENST00000298542ENST00000370879ENST00000464296ENSG00000228819ENST00000424708CIL_0000T1_0002ENSMUSG00000036131ENSMUST00000060650ENSMUST00000164311ENSMUSG00000050029ENSMUST00000053593
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000T1_0001ENSG00000123728ENST00000342983ENST00000370874ENST00000460462ENST00000620646ENSG00000165694ENST00000298542ENST00000370879ENST00000464296ENSG00000228819ENST00000424708CIL_0000T1_0002ENSMUSG00000036131ENSMUST00000060650ENSMUST00000164311ENSMUSG00000050029ENSMUST00000053593
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123728 ENST00000342983 6.606±0.00 N/A N/A 3.097±1.80 3.477±0.00 2.441±1.17 2.391±0.00 2.974±0.93 4.044±2.09 6.227±0.00 1.688±1.07 3.404±2.62 4.488±1.78 2.424±0.17
ENST00000370874 N/A N/A 1.095±0.00 0.825±0.00 N/A N/A 0.446±0.00 N/A N/A 0.972±0.00 N/A 1.186±0.00 N/A N/A
ENST00000460462 N/A N/A N/A N/A N/A N/A N/A N/A 2.655±0.00 N/A N/A 13.525±0.00 11.792±0.00 7.617±0.00
ENST00000490400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620646 N/A 2.715±0.00 1.399±0.00 N/A N/A N/A N/A 1.995±0.73 1.472±0.00 N/A N/A 2.253±0.20 1.972±1.33 2.599±0.00
ENSG00000165694 ENST00000298542 N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A 0.008±0.00 N/A N/A N/A 0.045±0.00 N/A
ENST00000370879 N/A N/A 0.361±0.00 0.025±0.00 0.019±0.00 N/A N/A 0.652±0.00 N/A N/A N/A 0.068±0.00 N/A 0.082±0.00
ENST00000464296 N/A N/A N/A N/A N/A N/A 0.017±0.00 0.087±0.00 0.017±0.00 N/A N/A N/A 0.023±0.00 0.013±0.00
ENSG00000228819 ENST00000424708 N/A 0.011±0.00 N/A 0.011±0.00 N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 0.039±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036131 ENSMUST00000060650 0.258±0.00 N/A 0.174±0.02 N/A N/A N/A N/A N/A 0.039±0.03 N/A 0.124±0.06 0.463±0.08 0.785±0.48 0.024±0.00
ENSMUST00000164311 0.437±0.07 0.205±0.00 N/A 0.268±0.00 0.626±0.38 0.162±0.09 0.077±0.02 0.064±0.05 0.025±0.00 0.068±0.04 0.138±0.03 0.695±0.26 0.102±0.03 0.186±0.10
ENSMUSG00000050029 ENSMUST00000053593 3.087±0.97 N/A 1.357±0.17 4.211±1.72 4.098±0.46 N/A 2.360±1.15 N/A 3.881±1.33 1.213±0.00 6.941±0.21 7.985±1.85 17.466±6.83 0.859±0.34

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