C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAP2C, member of RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342983 RAP2C-001 ENSG00000123728 9606 - X:132203025-132218124 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342983
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342983 6.606±0.00 3.097±1.80 3.477±0.00 2.441±1.17 2.391±0.00 2.974±0.93 4.044±2.09 6.227±0.00 1.688±1.07 3.404±2.62 4.488±1.78 2.424±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000T1 CIL_0000T1_0001 CGP X:132076993-132219480
CIL_0000GI CIL_0000GI_0002 CGP X:132203024-132489968

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 IDA transcription coactivator activity
GO:0003924 IEA GTPase activity
GO:0005525 IDA:IEA GTP binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0005829 IEA cytosol
GO:0005886 IDA plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0019003 IDA GDP binding
GO:0030336 ISS negative regulation of cell migration
GO:0031954 ISS positive regulation of protein autophosphorylation
GO:0032486 ISS Rap protein signal transduction
GO:0055037 IEA recycling endosome
GO:0055038 ISS recycling endosome membrane
GO:0061097 ISS regulation of protein tyrosine kinase activity
GO:0070062 IDA extracellular vesicular exosome
GO:2001141 IDA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053593 Rap2c-001 protein_coding Mus_musculus 0 2172

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