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Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 40
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124143 ARHGAP40 9606 + 20:38601934-38651035 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000243967 ARHGAP40-001 38626996-38650508 protein_coding
  ENST00000373345 ARHGAP40-201 38601934-38650652 protein_coding
  ENST00000373346 ARHGAP40-003 38643907-38650379 protein_coding
  ENST00000414158 ARHGAP40-004 38647063-38651035 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000243967ENST00000373345ENST00000373346ENST00000414158
Transcript ID Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000243967 0.045±0.00 0.382±0.00 N/A 0.172±0.00 N/A 0.171±0.00 N/A 0.026±0.00 0.407±0.00
ENST00000373345 0.041±0.00 N/A N/A N/A 0.245±0.00 N/A 0.017±0.00 0.061±0.00 N/A
ENST00000373346 N/A 0.430±0.00 0.258±0.00 N/A N/A 0.136±0.00 N/A 0.090±0.00 0.350±0.00
ENST00000414158 0.047±0.00 0.324±0.00 N/A N/A N/A N/A N/A N/A 0.437±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081Y CIL_00081Y_0001 VISTA 20:38219747-38821106
CIL_0004O3 CIL_0004O3_0001 CGP 20:38581195-38651035
CIL_0004NT CIL_0004NT_0001 CGP 20:38601934-38729372

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074625 ARHGAP40 Rho GTPase activating protein 40 protein_coding Danio_rerio
ENSMUSG00000074625 Arhgap40 Rho GTPase activating protein 40 protein_coding Mus_musculus

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