C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004O3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182035-ENSG00000124143 CGP 9606 20:38581195-38651035
GeneTranscriptPositionBiotype
ENSG00000124143 (ARHGAP40)
Rho GTPase activating protein 40 		ENST00000243967 (ARHGAP40-001) 38626996-38650508 protein_coding
ENST00000373345 (ARHGAP40-201) 38601934-38650652 protein_coding
ENST00000373346 (ARHGAP40-003) 38643907-38650379 protein_coding
ENST00000414158 (ARHGAP40-004) 38647063-38651035 protein_coding
ENSG00000213959 (RP5-1100H13.3)
 ENST00000397037 (RP5-1100H13.3-001) 38614913-38615476 processed_pseudogene
CIL_0004O3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044405-ENSMUSG00000074625 CGP 10090 2:158502612-158550762
GeneTranscriptPositionBiotype
ENSMUSG00000044405 (Adig)
adipogenin 		ENSMUST00000059889 (Adig-001) 158502612-158508198 protein_coding
ENSMUST00000109484 (Adig-002) 158502653-158508198 protein_coding
ENSMUST00000148187 (Adig-003) 158502739-158505908 processed_transcript
ENSMUSG00000074625 (Arhgap40)
Rho GTPase activating protein 40 		ENSMUST00000099133 (Arhgap40-001) 158512796-158550762 protein_coding
ENSMUST00000135838 (Arhgap40-002) 158541737-158550762 retained_intron
ENSMUST00000165398 (Arhgap40-201) 158512796-158550628 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004O3_0001ENSG00000124143ENST00000243967ENST00000373345ENST00000373346ENST00000414158ENSG00000213959ENST00000397037CIL_0004O3_0002ENSMUSG00000044405ENSMUST00000059889ENSMUST00000109484ENSMUST00000148187ENSMUSG00000074625ENSMUST00000099133ENSMUST00000135838ENSMUST00000165398
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004O3_0001ENSG00000124143ENST00000243967ENST00000373345ENST00000373346ENST00000414158ENSG00000213959ENST00000397037CIL_0004O3_0002ENSMUSG00000044405ENSMUST00000059889ENSMUST00000109484ENSMUST00000148187ENSMUSG00000074625ENSMUST00000099133ENSMUST00000135838ENSMUST00000165398
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124143 ENST00000243967 N/A N/A N/A 0.045±0.00 0.382±0.00 N/A N/A 0.172±0.00 N/A 0.171±0.00 N/A N/A 0.026±0.00 0.407±0.00
ENST00000373345 N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A 0.245±0.00 N/A N/A 0.017±0.00 0.061±0.00 N/A
ENST00000373346 N/A N/A N/A N/A 0.430±0.00 N/A 0.258±0.00 N/A N/A 0.136±0.00 N/A N/A 0.090±0.00 0.350±0.00
ENST00000414158 N/A N/A N/A 0.047±0.00 0.324±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.437±0.00
ENSG00000213959 ENST00000397037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.290±0.00 N/A 0.081±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044405 ENSMUST00000059889 147.053±44.63 49.321±18.69 2.831±0.80 0.193±0.00 150.084±25.39 1.707±0.54 6.627±2.92 13.236±1.31 N/A 7.254±2.02 2.700±1.08 10.082±2.90 0.999±1.07 78.266±23.52
ENSMUST00000109484 N/A 23.721±0.00 N/A 0.295±0.00 N/A 0.555±0.00 N/A N/A 0.087±0.08 1.560±0.00 1.085±0.41 7.691±5.05 0.490±0.31 N/A
ENSMUST00000148187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.336±0.04 N/A
ENSMUSG00000074625 ENSMUST00000099133 0.373±0.00 N/A 2.959±1.10 0.032±0.00 N/A N/A N/A 0.065±0.03 0.018±0.01 0.284±0.00 0.094±0.00 0.361±0.25 0.004±0.00 N/A
ENSMUST00000135838 0.501±0.36 N/A 10.464±0.81 0.171±0.00 4.177±0.32 0.067±0.00 N/A 0.091±0.05 0.040±0.02 0.762±0.00 0.032±0.00 0.875±0.37 0.091±0.08 N/A
ENSMUST00000165398 0.043±0.00 0.022±0.00 3.928±0.00 N/A 1.417±0.20 0.032±0.01 0.026±0.01 0.051±0.01 0.009±0.00 0.629±0.36 0.016±0.00 0.372±0.18 0.171±0.11 0.241±0.01

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