C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: matrilin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360607 MATN4-004 ENSG00000124159 9606 - 20:45293450-45308327 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartLungOvaryTestisENST00000360607
Transcript ID Adrenal Colon Heart Lung Ovary Testis
ENST00000360607 0.073±0.00 0.019±0.00 0.036±0.00 0.163±0.00 0.330±0.00 0.244±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003V4 CIL_0003V4_0001 CGP 20:45252239-45308529
CIL_0003L4 CIL_0003L4_0001 CGP 20:45293445-45317824

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005576 TAS extracellular region
GO:0030198 TAS extracellular matrix organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109358 Matn4-004 protein_coding Mus_musculus 0 1888
ENSMUST00000103104 Matn4-002 protein_coding Mus_musculus 0 1186
ENSMUST00000103103 Matn4-003 protein_coding Mus_musculus 0 1186
ENSMUST00000109359 Matn4-001 protein_coding Mus_musculus 0 1186
ENSMUST00000154940 Matn4-005 retained_intron Mus_musculus 0 270

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