C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124614 RPS10 9606 - 6:34417454-34426125 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000326199 RPS10-001 34417454-34426125 protein_coding
  ENST00000344700 RPS10-005 34417454-34425221 protein_coding
  ENST00000464218 RPS10-004 34417454-34425580 processed_transcript
  ENST00000467531 RPS10-003 34417454-34425784 processed_transcript
  ENST00000480942 RPS10-006 34424276-34426050 processed_transcript
  ENST00000494077 RPS10-002 34417454-34426026 processed_transcript
  ENST00000621356 RPS10-201 34417466-34426041 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000326199ENST00000464218
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000326199 146.547±0.00 236.600±0.00 N/A 108.548±49.08 156.535±43.16 47.349±0.00 113.394±32.08 109.633±24.54 226.799±178.73 176.589±0.00 525.481±318.04 426.685±50.57 100.229±8.82
ENST00000464218 N/A N/A 37.276±0.00 104.671±0.00 85.335±0.00 N/A 30.893±0.00 84.613±0.00 84.581±0.00 126.763±0.00 371.416±313.21 656.038±266.66 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PV CIL_0001PV_0002 CGP 6:34279679-34426048
CIL_0004LP CIL_0004LP_0002 CGP 6:34417454-34535231

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005840 NAS ribosome
GO:0005925 IDA focal adhesion
GO:0006412 IC translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022627 IDA cytosolic small ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034897 rps10 ribosomal protein S10 protein_coding Danio_rerio
ENSMUSG00000052146 Rps10 ribosomal protein S10 protein_coding Mus_musculus
ENSMUSG00000060438 Rps10-ps1 ribosomal protein S10, pseudogene 1 protein_coding Mus_musculus

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