C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000052146 Rps10 10090 - 17:27630422-27636629 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025052 Rps10-002 27630425-27635240 protein_coding
  ENSMUST00000114881 Rps10-003 27630424-27636629 protein_coding
  ENSMUST00000114882 Rps10-001 27630422-27635276 protein_coding
  ENSMUST00000145226 Rps10-004 27631958-27635229 retained_intron
  ENSMUST00000150763 Rps10-005 27631662-27634254 retained_intron
  ENSMUST00000152982 Rps10-007 27634155-27635244 processed_transcript
  ENSMUST00000155071 Rps10-006 27631030-27635276 processed_transcript
  ENSMUST00000178774 Rps10-201 27630465-27634475 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025052ENSMUST00000114882ENSMUST00000155071ENSMUST00000178774
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025052 127.790±59.80 N/A 79.604±0.00 82.437±0.00 114.110±28.78 81.914±8.72 33.097±10.00 67.632±23.74 124.074±117.96 78.881±4.94 N/A 173.172±64.71 64.895±0.00 19.374±4.15
ENSMUST00000114882 68.244±7.87 N/A 424.919±36.85 201.988±107.40 58.832±9.11 82.952±43.05 67.042±11.72 100.546±31.21 278.096±264.57 34.990±7.21 151.993±19.31 130.292±94.47 265.969±153.04 57.309±16.27
ENSMUST00000155071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 139.796±0.00 N/A
ENSMUST00000178774 85.249±52.34 373.572±6.05 N/A N/A 365.173±107.23 402.704±40.39 37.011±9.12 134.867±31.19 116.349±8.02 184.741±44.36 N/A 387.960±145.05 458.284±156.18 21.181±3.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PV CIL_0001PV_0003 CGP 17:27579382-27636629
CIL_0004LP CIL_0004LP_0003 CGP 17:27630422-27711106

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000028 IEA ribosomal small subunit assembly
GO:0003735 IEA structural constituent of ribosome
GO:0005730 ISS nucleolus
GO:0005840 IEA ribosome
GO:0022627 IEA cytosolic small ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034897 rps10 ribosomal protein S10 protein_coding Danio_rerio
ENSG00000124614 RPS10 ribosomal protein S10 protein_coding Homo_sapiens
ENSG00000270800 RPS10-NUDT3 RPS10-NUDT3 readthrough protein_coding Homo_sapiens

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