C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004LP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000034897-ENSDARG00000042128 CGP 7955 6:54129854-54226707
GeneTranscriptPositionBiotype
ENSDARG00000034897 (rps10)
ribosomal protein S10 		ENSDART00000045901 (rps10-001) 54129854-54135857 protein_coding
ENSDART00000149468 (rps10-003) 54132231-54135805 retained_intron
ENSDART00000149945 (rps10-002) 54132620-54135674 protein_coding
ENSDARG00000042128 (pacsin1b)
protein kinase C and casein kinase substrate in neurons 1b 		ENSDART00000056830 (pacsin1b-002) 54142801-54226707 protein_coding
ENSDART00000128456 (pacsin1b-001) 54176812-54226693 protein_coding
ENSDART00000149542 (pacsin1b-003) 54194783-54211765 protein_coding
CIL_0004LP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124614-ENSG00000124507 CGP 9606 6:34417454-34535231
GeneTranscriptPositionBiotype
ENSG00000124507 (PACSIN1)
protein kinase C and casein kinase substrate in neurons 1 		ENST00000244458 (PACSIN1-001) 34466139-34535231 protein_coding
ENST00000374043 (PACSIN1-003) 34466139-34535229 protein_coding
ENST00000486120 (PACSIN1-005) 34514889-34529552 processed_transcript
ENST00000487760 (PACSIN1-004) 34514890-34527694 processed_transcript
ENST00000493633 (PACSIN1-002) 34485070-34527714 processed_transcript
ENST00000538621 (PACSIN1-201) 34514872-34535221 protein_coding
ENST00000620693 (PACSIN1-202) 34466061-34535221 protein_coding
ENSG00000124614 (RPS10)
ribosomal protein S10 		ENST00000326199 (RPS10-001) 34417454-34426125 protein_coding
ENST00000344700 (RPS10-005) 34417454-34425221 protein_coding
ENST00000464218 (RPS10-004) 34417454-34425580 processed_transcript
ENST00000467531 (RPS10-003) 34417454-34425784 processed_transcript
ENST00000480942 (RPS10-006) 34424276-34426050 processed_transcript
ENST00000494077 (RPS10-002) 34417454-34426026 processed_transcript
ENST00000621356 (RPS10-201) 34417466-34426041 protein_coding
ENSG00000270800 (RPS10-NUDT3)
RPS10-NUDT3 readthrough 		ENST00000605528 (RPS10-NUDT3-001) 34288770-34426048 protein_coding
CIL_0004LP_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052146-ENSMUSG00000040276 CGP 10090 17:27630422-27711106
GeneTranscriptPositionBiotype
ENSMUSG00000040276 (Pacsin1)
protein kinase C and casein kinase substrate in neurons 1 		ENSMUST00000045896 (Pacsin1-001) 27655588-27711106 protein_coding
ENSMUST00000097360 (Pacsin1-002) 27685197-27708659 protein_coding
ENSMUST00000114872 (Pacsin1-004) 27655643-27708677 protein_coding
ENSMUST00000114873 (Pacsin1-003) 27655509-27708659 protein_coding
ENSMUST00000155259 (Pacsin1-005) 27685227-27686085 processed_transcript
ENSMUSG00000052146 (Rps10)
ribosomal protein S10 		ENSMUST00000025052 (Rps10-002) 27630425-27635240 protein_coding
ENSMUST00000114881 (Rps10-003) 27630424-27636629 protein_coding
ENSMUST00000114882 (Rps10-001) 27630422-27635276 protein_coding
ENSMUST00000145226 (Rps10-004) 27631958-27635229 retained_intron
ENSMUST00000150763 (Rps10-005) 27631662-27634254 retained_intron
ENSMUST00000152982 (Rps10-007) 27634155-27635244 processed_transcript
ENSMUST00000155071 (Rps10-006) 27631030-27635276 processed_transcript
ENSMUST00000178774 (Rps10-201) 27630465-27634475 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004LP_0001ENSDARG00000034897ENSDART00000045901ENSDART00000149468ENSDART00000149945ENSDARG00000042128ENSDART00000056830ENSDART00000128456ENSDART00000149542CIL_0004LP_0002ENSG00000124507ENST00000244458ENST00000374043ENST00000486120ENST00000487760ENST00000493633ENST00000538621ENST00000620693ENSG00000124614ENST00000326199ENST00000344700ENST00000464218ENST00000467531ENST00000480942ENST00000494077ENST00000621356ENSG00000270800ENST00000605528CIL_0004LP_0003ENSMUSG00000040276ENSMUST00000045896ENSMUST00000097360ENSMUST00000114872ENSMUST00000114873ENSMUST00000155259ENSMUSG00000052146ENSMUST00000025052ENSMUST00000114881ENSMUST00000114882ENSMUST00000145226ENSMUST00000150763ENSMUST00000152982ENSMUST00000155071ENSMUST00000178774
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004LP_0001ENSDARG00000034897ENSDART00000045901ENSDART00000149468ENSDARG00000042128ENSDART00000056830ENSDART00000128456CIL_0004LP_0002ENSG00000124507ENST00000244458ENST00000374043ENST00000486120ENST00000493633ENST00000538621ENST00000620693ENSG00000124614ENST00000326199ENST00000464218ENSG00000270800ENST00000605528CIL_0004LP_0003ENSMUSG00000040276ENSMUST00000045896ENSMUST00000097360ENSMUST00000114872ENSMUST00000114873ENSMUSG00000052146ENSMUST00000025052ENSMUST00000114882ENSMUST00000155071ENSMUST00000178774
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000034897 ENSDART00000045901 N/A N/A N/A 150.281±94.69 N/A N/A 889.821±424.54 95.010±81.49 604.746±0.00 N/A 903.892±0.00 N/A N/A N/A
ENSDART00000149468 N/A N/A N/A N/A N/A N/A 1.645±0.08 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000042128 ENSDART00000056830 N/A N/A N/A 10.063±2.79 N/A N/A 0.639±0.43 2.064±0.19 1.635±0.00 N/A 2.644±0.00 N/A N/A N/A
ENSDART00000128456 N/A N/A N/A N/A N/A N/A N/A 0.611±0.00 2.956±0.00 N/A N/A N/A N/A N/A
ENSDART00000149542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124507 ENST00000244458 0.003±0.00 N/A 0.005±0.00 N/A 0.009±0.00 N/A N/A 0.027±0.00 0.009±0.00 N/A 0.004±0.00 0.041±0.03 0.041±0.04 N/A
ENST00000374043 0.004±0.00 0.093±0.00 0.005±0.00 N/A 0.009±0.00 N/A N/A 0.029±0.00 0.020±0.01 N/A 0.005±0.00 0.086±0.01 0.054±0.05 N/A
ENST00000486120 N/A N/A N/A 11.971±0.00 N/A N/A 0.479±0.00 N/A N/A 0.394±0.00 N/A N/A 0.082±0.00 N/A
ENST00000487760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493633 N/A N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 0.985±0.00 N/A N/A 0.259±0.00 N/A
ENST00000538621 N/A N/A N/A 26.473±0.00 N/A 0.591±0.00 N/A N/A N/A N/A N/A 0.175±0.00 N/A N/A
ENST00000620693 0.003±0.00 0.151±0.00 0.002±0.00 33.239±15.22 0.061±0.06 N/A 1.982±0.00 0.408±0.40 0.021±0.02 0.169±0.00 0.004±0.00 0.107±0.00 0.028±0.00 0.516±0.00
ENSG00000124614 ENST00000326199 146.547±0.00 236.600±0.00 N/A N/A 108.548±49.08 156.535±43.16 47.349±0.00 113.394±32.08 109.633±24.54 226.799±178.73 176.589±0.00 525.481±318.04 426.685±50.57 100.229±8.82
ENST00000344700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464218 N/A N/A 37.276±0.00 N/A 104.671±0.00 85.335±0.00 N/A 30.893±0.00 84.613±0.00 84.581±0.00 126.763±0.00 371.416±313.21 656.038±266.66 N/A
ENST00000467531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270800 ENST00000605528 N/A N/A N/A 70.036±0.00 N/A N/A 52.403±0.00 N/A N/A N/A N/A 65.525±0.00 51.273±0.00 63.919±27.71
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040276 ENSMUST00000045896 0.071±0.04 1.012±0.19 0.156±0.02 19.044±21.20 1.805±1.09 N/A 0.110±0.03 0.184±0.12 0.040±0.01 0.191±0.07 0.056±0.07 0.601±0.24 0.201±0.13 N/A
ENSMUST00000097360 N/A N/A N/A 2.187±0.04 N/A N/A N/A N/A 0.030±0.01 0.239±0.00 N/A 1.883±0.69 N/A N/A
ENSMUST00000114872 0.073±0.00 N/A 0.115±0.01 408.431±0.00 N/A N/A 0.221±0.02 0.136±0.01 0.042±0.01 0.169±0.00 0.037±0.02 1.551±0.81 1.036±1.70 16.511±27.80
ENSMUST00000114873 N/A N/A 0.079±0.00 N/A 0.768±0.29 N/A N/A 0.232±0.08 0.022±0.00 0.174±0.00 0.089±0.00 N/A N/A N/A
ENSMUST00000155259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000052146 ENSMUST00000025052 127.790±59.80 N/A 79.604±0.00 82.437±0.00 114.110±28.78 81.914±8.72 33.097±10.00 67.632±23.74 124.074±117.96 78.881±4.94 N/A 173.172±64.71 64.895±0.00 19.374±4.15
ENSMUST00000114881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114882 68.244±7.87 N/A 424.919±36.85 201.988±107.40 58.832±9.11 82.952±43.05 67.042±11.72 100.546±31.21 278.096±264.57 34.990±7.21 151.993±19.31 130.292±94.47 265.969±153.04 57.309±16.27
ENSMUST00000145226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 139.796±0.00 N/A
ENSMUST00000178774 85.249±52.34 373.572±6.05 N/A N/A 365.173±107.23 402.704±40.39 37.011±9.12 134.867±31.19 116.349±8.02 184.741±44.36 N/A 387.960±145.05 458.284±156.18 21.181±3.62

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