C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIO kinase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124784 RIOK1 9606 + 6:7389496-7418037 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264874 RIOK1-002 7396752-7418037 retained_intron
  ENST00000379834 RIOK1-001 7389496-7418037 protein_coding
  ENST00000475351 RIOK1-003 7389793-7402848 nonsense_mediated_decay
  ENST00000484626 RIOK1-004 7403934-7405184 retained_intron
  ENST00000493691 RIOK1-005 7410378-7411567 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonMuscleOvaryPlacentaTestisENST00000264874ENST00000379834
Transcript ID Adrenal Colon Muscle Ovary Placenta Testis
ENST00000264874 N/A N/A 0.739±0.00 N/A N/A N/A
ENST00000379834 9.723±0.00 6.568±0.00 5.861±0.00 10.653±6.27 8.404±1.80 26.693±6.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000817 CIL_000817_0001 VISTA 6:6863717-7465821
CIL_0007T6 CIL_0007T6_0001 VISTA 6:7260927-7862502
CIL_00004W CIL_00004W_0001 CGP 6:7268306-7389743
CIL_00004Q CIL_00004Q_0001 CGP 6:7326656-7418037
CIL_00037Y CIL_00037Y_0001 CGP 6:7389496-7586717

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016399 riok1 RIO kinase 1 (yeast) protein_coding Danio_rerio
ENSMUSG00000021428 Riok1 RIO kinase 1 (yeast) protein_coding Mus_musculus

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