C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEK proto-oncogene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124795 DEK 9606 - 6:18223868-18264823 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000244776 DEK-002 18225470-18264541 protein_coding
  ENST00000397239 DEK-001 18223868-18264823 protein_coding
  ENST00000503715 DEK-005 18255736-18264541 protein_coding
  ENST00000505224 DEK-003 18225025-18264535 nonsense_mediated_decay
  ENST00000507591 DEK-009 18225879-18249740 protein_coding
  ENST00000512145 DEK-008 18237050-18256374 retained_intron
  ENST00000515742 DEK-006 18256373-18264208 protein_coding
  ENST00000515770 DEK-007 18236492-18256439 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000244776ENST00000397239ENST00000505224ENST00000512145
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000244776 N/A N/A N/A 7.899±0.00 N/A 0.995±0.00 N/A 7.022±0.00 N/A N/A N/A N/A N/A
ENST00000397239 N/A 1.546±0.00 4.808±0.00 8.994±0.00 9.360±0.00 2.061±0.00 7.352±0.00 13.221±0.00 11.941±0.00 1.936±0.00 8.572±2.45 9.270±6.53 N/A
ENST00000505224 11.986±0.00 0.667±0.00 4.617±0.00 N/A 16.021±0.00 7.351±0.00 N/A N/A N/A 1.304±0.00 7.825±0.00 N/A 7.406±0.00
ENST00000512145 N/A 1.721±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090E CIL_00090E_0001 VISTA 6:17631749-18233261
CIL_0003RV CIL_0003RV_0001 CGP 6:18155329-18264823
CIL_00041Y CIL_00041Y_0001 CGP 6:18223868-18468874

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007165 TAS signal transduction
GO:0016568 IEA chromatin modification
GO:0019079 TAS viral genome replication
GO:0042393 IDA histone binding
GO:0043292 IEA contractile fiber
GO:0044822 IDA poly(A) RNA binding
GO:2000779 IMP regulation of double-strand break repair
GO:2001032 IEA regulation of double-strand break repair via nonhomologous end joining

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070108 dek DEK oncogene protein_coding Danio_rerio
ENSMUSG00000021377 Dek DEK oncogene (DNA binding) protein_coding Mus_musculus

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